RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TSPAN16Q9UKR8 245 aa23.64■■□□□ 1.37
PTPN18-205ENST00000428843 MAGED2Q9UNF1 606 aaPredicted RBP23.64■■□□□ 1.37
PTPN18-205ENST00000428843 CYP26A1O43174 497 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 NPR3P17342 541 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 CCR2P41597 374 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 CNGA2Q16280 664 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 TJAP1Q5JTD0 557 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 PRSS36Q5K4E3 855 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 GET4Q7L5D6 327 aaPredicted RBP23.63■■□□□ 1.37
PTPN18-205ENST00000428843 TTC30AQ86WT1 665 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 ANKRD52Q8NB46 1076 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 LEMD2Q8NC56 503 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 TCEAL4Q96EI5 215 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 ANP32EQ9BTT0 268 aa23.63■■□□□ 1.37
PTPN18-205ENST00000428843 ZNF638Q14966 1978 aaKnown RBP23.63■■□□□ 1.37
PTPN18-205ENST00000428843 F8VZ95 297 aa23.62■■□□□ 1.37
PTPN18-205ENST00000428843 NRG2O14511 850 aaPredicted RBP23.62■■□□□ 1.37
PTPN18-205ENST00000428843 ZNF197O14709 1029 aa23.62■■□□□ 1.37
PTPN18-205ENST00000428843 SP100P23497 879 aaPredicted RBP23.62■■□□□ 1.37
PTPN18-205ENST00000428843 GNA15P30679 374 aa23.62■■□□□ 1.37
PTPN18-205ENST00000428843 LCLAT1Q6UWP7 414 aa23.62■■□□□ 1.37
PTPN18-205ENST00000428843 DENND5BQ6ZUT9 1274 aa23.62■■□□□ 1.37
PTPN18-205ENST00000428843 HESX1Q9UBX0 185 aa23.62■■□□□ 1.37
PTPN18-205ENST00000428843 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.62■■□□□ 1.37
PTPN18-205ENST00000428843 MRPS23Q9Y3D9 190 aaKnown RBP23.62■■□□□ 1.37
PTPN18-205ENST00000428843 HHLA1C9JL84 531 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 TNFRSF10BO14763 440 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 THAP12O43422 761 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 MOSPD3O75425 235 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 SSTR3P32745 418 aaPredicted RBP23.61■■□□□ 1.37
PTPN18-205ENST00000428843 CLCN1P35523 988 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 JAM2P57087 298 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 USP46P62068 366 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 STILQ15468 1287 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 GAREM2Q75VX8 874 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 ADHFE1Q8IWW8 467 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 NUP93Q8N1F7 819 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 UBA3Q8TBC4 463 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 ING5Q8WYH8 240 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 TRMT2BQ96GJ1 504 aaKnown RBP23.61■■□□□ 1.37
PTPN18-205ENST00000428843 RPGRIP1Q96KN7 1286 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 MYRFLQ96LU7 910 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 XPO4Q9C0E2 1151 aaKnown RBP23.61■■□□□ 1.37
PTPN18-205ENST00000428843 IL21Q9HBE4 155 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 PRKAG3Q9UGI9 489 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 DOCK8Q8NF50 2099 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 DENND4CQ5VZ89 1909 aa23.61■■□□□ 1.37
PTPN18-205ENST00000428843 OBSL1O75147 1896 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 C5orf42Q9H799 3197 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 A0A1W2PRU2 124 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 MICAL2O94851 1124 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 FGF19O95750 216 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 GJA1P17302 382 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 CEBPBP17676 345 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 GABRR2P28476 465 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 PBX1P40424 430 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 SLC5A3P53794 718 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 BCAT1P54687 386 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 PTK2Q05397 1052 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 BST2Q10589 180 aaKnown RBP23.6■■□□□ 1.37
PTPN18-205ENST00000428843 PKDCCQ504Y2 493 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 SHKBP1Q8TBC3 707 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 ZNF606Q8WXB4 792 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 SPAG5Q96R06 1193 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 MYADMQ96S97 322 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 TTLL2Q9BWV7 592 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 PNPLA8Q9NP80 782 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 UXTQ9UBK9 157 aaPredicted RBP23.6■■□□□ 1.37
PTPN18-205ENST00000428843 USTQ9Y2C2 406 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 NR2E1Q9Y466 385 aa23.6■■□□□ 1.37
PTPN18-205ENST00000428843 M0QYV0 167 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 MED7O43513 233 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 F11P03951 625 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 GBP2P32456 591 aaPredicted RBP23.59■■□□□ 1.37
PTPN18-205ENST00000428843 ZP2Q05996 745 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 PDE4CQ08493 712 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 IFRD2Q12894 506 aaPredicted RBP23.59■■□□□ 1.37
PTPN18-205ENST00000428843 OTOP3Q7RTS5 596 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 GPRIN1Q7Z2K8 1008 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 CACNA2D4Q7Z3S7 1137 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 SLC47A2Q86VL8 602 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 SCAMP5Q8TAC9 235 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 FGF13Q92913 245 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.59■■□□□ 1.37
PTPN18-205ENST00000428843 EHD2Q9NZN4 543 aa23.59■■□□□ 1.37
PTPN18-205ENST00000428843 C2CD4DB7Z1M9 353 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 LOC730098B7Z3J9 87 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 TULP2O00295 520 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 CBFA2T2O43439 604 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 RTN3O95197 1032 aaPredicted RBP23.58■■□□□ 1.37
PTPN18-205ENST00000428843 CDC25CP30307 473 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 SOX5P35711 763 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 STAT1P42224 750 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 SLC8A3P57103 927 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 BPIFB4P59827 614 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 TEAD2Q15562 447 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 TMEM150AQ86TG1 271 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 NPAS3Q8IXF0 933 aa23.58■■□□□ 1.37
PTPN18-205ENST00000428843 TDRD5Q8NAT2 981 aaKnown RBP23.58■■□□□ 1.37
PTPN18-205ENST00000428843 ACSF2Q96CM8 615 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms