RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 INSL6Q9Y581 213 aa10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 SF3B1O75533 1304 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF638Q14966 1978 aaKnown RBP10.06□□□□□ -0.8
HMGCLL1-206ENST00000428842 PALMO75781 387 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 USP17L7P0C7H9 530 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 H2AFXP16104 143 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADIGQ0VDE8 80 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MESDQ14696 234 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 CDO1Q16878 200 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 INTS6LQ5JSJ4 861 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 TXNRD3NBQ6F5E7 133 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ACAD10Q6JQN1 1059 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 FBXO38Q6PIJ6 1188 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 FAM183BPQ6ZVS7 135 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MON1BQ7L1V2 547 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 CCDC170Q8IYT3 715 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 CRYBG2Q8N1P7 616 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 LRRN4CLQ8ND94 238 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 FBXO22Q8NEZ5 403 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MICAL1Q8TDZ2 1067 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 EDEM1Q92611 657 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MCEEQ96PE7 176 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 PKMYT1Q99640 499 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 GDF15Q99988 308 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 NUP85Q9BW27 656 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 COLEC11Q9BWP8 271 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MRPL9Q9BYD2 267 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 NUCKS1Q9H1E3 243 aaKnown RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 CTTNBP2NLQ9P2B4 639 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MYO6Q9UM54 1294 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 USTQ9Y2C2 406 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 V9GYY5 206 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 PTPRDP23468 1912 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF185O15231 689 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 PAPSS1O43252 624 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZSCAN12O43309 604 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 LCA5LO95447 670 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 H2AFZP0C0S5 128 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 VDRP11473 427 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 FGFR3P22607 806 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 RFC1P35251 1148 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ROR1Q01973 937 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZNF252P-AS1Q0IIN9 211 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 PSMD5Q16401 504 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 C15orf59Q2T9L4 293 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ATP13A4Q4VNC1 1196 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 PKDCCQ504Y2 493 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 LCLAT1Q6UWP7 414 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 H2AFVQ71UI9 128 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 TCF25Q9BQ70 676 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ISCUQ9H1K1 167 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 PCDHB8Q9UN66 801 aa10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 MAGED2Q9UNF1 606 aaPredicted RBP10.05□□□□□ -0.8
HMGCLL1-206ENST00000428842 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 TEX28O15482 410 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 HOXA2O43364 376 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 IPO7O95373 1038 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 CNPP09543 421 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 MMP8P22894 467 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 FLT3P36888 993 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 GGCXP38435 758 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 GRIK1P39086 918 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 MRPS25P82663 173 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 ATP11AP98196 1134 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 CENPCQ03188 943 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 TAP1Q03518 808 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 KIF5AQ12840 1032 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 CNGA2Q16280 664 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 MGAT5BQ3V5L5 792 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 RASIP1Q5U651 963 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 OR6B2Q6IFH4 312 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 ADGRD2Q7Z7M1 963 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 ERICH1Q86X53 443 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 NETO2Q8NC67 525 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 POF1BQ8WVV4 589 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 CFAP57Q96MR6 1250 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 UROC1Q96N76 676 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 METTL5Q9NRN9 209 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 SPG21Q9NZD8 308 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 NR2E3Q9Y5X4 410 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 GRID2IPA4D2P6 1211 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 GOLGA6L9A6NEM1 432 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 RTN2O75298 545 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 TBX18O95935 607 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 ATP1A1P05023 1023 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 CYP11A1P05108 521 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 PAEPP09466 180 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 METTL23Q86XA0 190 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 PKNOX2Q96KN3 472 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 PLEKHA4Q9H4M7 779 aa10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 BZW2Q9Y6E2 419 aaKnown RBP10.04□□□□□ -0.8
HMGCLL1-206ENST00000428842 ATG2AQ2TAZ0 1938 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms