RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GRIK1P39086 918 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 ME1P48163 572 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 GRSF1Q12849 480 aaKnown RBP eCLIP16.57■□□□□ 0.24
SEC13-210ENST00000428626 STK4Q13043 487 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 PDGFRLQ15198 375 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 GAB4Q2WGN9 574 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 WDR72Q3MJ13 1102 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 CC2D1AQ6P1N0 951 aaPredicted RBP16.57■□□□□ 0.24
SEC13-210ENST00000428626 KIAA0895Q8NCT3 520 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 TTLL2Q9BWV7 592 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 ZNF518BQ9C0D4 1074 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 DUS2Q9NX74 493 aaKnown RBP16.57■□□□□ 0.24
SEC13-210ENST00000428626 RCOR1Q9UKL0 485 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 RAB23Q9ULC3 237 aa16.57■□□□□ 0.24
SEC13-210ENST00000428626 R3HCC1Q9Y3T6 440 aaKnown RBP16.57■□□□□ 0.24
SEC13-210ENST00000428626 TPRP12270 2363 aaKnown RBP16.56■□□□□ 0.24
SEC13-210ENST00000428626 PTPN1P18031 435 aaKnown RBP16.56■□□□□ 0.24
SEC13-210ENST00000428626 HDCP19113 662 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 SNRPFP62306 86 aaKnown RBP16.56■□□□□ 0.24
SEC13-210ENST00000428626 LMNB2Q03252 620 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 KNOP1Q1ED39 458 aaKnown RBP16.56■□□□□ 0.24
SEC13-210ENST00000428626 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
SEC13-210ENST00000428626 DENND5BQ6ZUT9 1274 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 HS2ST1Q7LGA3 356 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 FAM160A2Q8N612 972 aaPredicted RBP16.56■□□□□ 0.24
SEC13-210ENST00000428626 OR6B3Q8NGW1 331 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 P2RY13Q9BPV8 354 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 B3GNT5Q9BYG0 378 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 RNF38Q9H0F5 515 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 SNX25Q9H3E2 840 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 SMYD3Q9H7B4 428 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 ARHGAP26Q9UNA1 814 aa16.56■□□□□ 0.24
SEC13-210ENST00000428626 MYOFQ9NZM1 2061 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 DCDC2BA2VCK2 349 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 LRRIQ3A6PVS8 624 aaPredicted RBP16.55■□□□□ 0.24
SEC13-210ENST00000428626 SCAMP3O14828 347 aaKnown RBP16.55■□□□□ 0.24
SEC13-210ENST00000428626 VNN1O95497 513 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 STAU1O95793 577 aaKnown RBP16.55■□□□□ 0.24
SEC13-210ENST00000428626 TCF3P15923 654 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 CNR2P34972 360 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 RAP1GAPP47736 663 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 CDH8P55286 799 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 KCNB1Q14721 858 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 MAPRE1Q15691 268 aaKnown RBP16.55■□□□□ 0.24
SEC13-210ENST00000428626 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 CPA6Q8N4T0 437 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 C8orf48Q96LL4 319 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 SDCBP2Q9H190 292 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 SEMA4GQ9NTN9 838 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 DMAC2Q9NW81 257 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 FAM13BQ9NYF5 915 aa16.55■□□□□ 0.24
SEC13-210ENST00000428626 NXF1Q9UBU9 619 aaKnown RBP16.55■□□□□ 0.24
SEC13-210ENST00000428626 CNOT1A5YKK6 2376 aaKnown RBP16.55■□□□□ 0.24
SEC13-210ENST00000428626 PRR5-ARHGAP8B1AHC4 643 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 LEFTY2O00292 366 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 GDF9O60383 454 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 EXOC3O60645 756 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 OLFM2O95897 454 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 SLFN14P0C7P3 912 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 OPRD1P41143 372 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 IFNAR2P48551 515 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 TNNC1P63316 161 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 NOP14P78316 857 aaKnown RBP16.54■□□□□ 0.24
SEC13-210ENST00000428626 DLG4P78352 724 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 CLDN10P78369 228 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 ARHGAP8P85298 464 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 MESP2Q0VG99 397 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 KMT5BQ4FZB7 885 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 PAQR9Q6ZVX9 377 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
SEC13-210ENST00000428626 FSIP1Q8NA03 581 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 PARD3BQ8TEW8 1205 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 CEP295NLQ96MC4 621 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 HHIPQ96QV1 700 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 KCTD10Q9H3F6 313 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 ZDHHC9Q9Y397 364 aa16.54■□□□□ 0.24
SEC13-210ENST00000428626 A0A1B0GVL5 298 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 A8MXQ7 604 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 TRIM66O15016 1216 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 OAS1P00973 400 aaKnown RBP16.53■□□□□ 0.24
SEC13-210ENST00000428626 C4BPAP04003 597 aaKnown RBP16.53■□□□□ 0.24
SEC13-210ENST00000428626 FAM163BP0C2L3 166 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 DRD1P21728 446 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 ANXA13P27216 316 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 TAF10Q12962 218 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 PRR23CQ6ZRP0 262 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 CEP68Q76N32 757 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 SFTPA1Q8IWL2 248 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 B3GALNT2Q8NCR0 500 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 RPLP0P6Q8NHW5 317 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 GAB3Q8WWW8 586 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 CD101Q93033 1021 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 ATP2A3Q93084 1043 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 KCNK16Q96T55 309 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 VRTNQ9H8Y1 702 aa16.53■□□□□ 0.24
SEC13-210ENST00000428626 SMPD4Q9NXE4 827 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms