RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 C3orf70A6NLC5 250 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-210ENST00000428307 CST8O60676 142 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 HUS1O60921 280 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 GABBR2O75899 941 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 ZSCAN5DPP0CG00 497 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 ETS1P14921 441 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 ITIH2P19823 946 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 KDELR1P24390 212 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 CHKAP35790 457 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 MLH1P40692 756 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 ZNF143P52747 638 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-210ENST00000428307 GSCP56915 257 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-210ENST00000428307 STILQ15468 1287 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 CCDC142Q17RM4 750 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 PKDCCQ504Y2 493 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 DENND2CQ68D51 928 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 SCYL2Q6P3W7 929 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 RSPH3Q86UC2 560 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 UNC93AQ86WB7 457 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 GAD1Q99259 594 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 TMEM121Q9BTD3 319 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 CALN1Q9BXU9 219 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-210ENST00000428307 ASNSD1Q9NWL6 643 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 WHRNQ9P202 907 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 ANAPC5Q9UJX4 755 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 NEU2Q9Y3R4 380 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 TRIP11Q15643 1979 aa10.93□□□□□ -0.66
HDAC9-210ENST00000428307 TLDC2A0PJX2 215 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 SMIM23A6NLE4 172 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 ATP2C2O75185 946 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 IFNB1P01574 187 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 GPD1P21695 349 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 THPOP40225 353 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 COPS2P61201 443 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 SYDE1Q6ZW31 735 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 CCDC89Q8N998 374 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 ZNF560Q96MR9 790 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 PEBP4Q96S96 227 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 CNPY3Q9BT09 278 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 AGO3Q9H9G7 860 aaKnown RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 FAM105AQ9NUU6 356 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 RNF186Q9NXI6 227 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 GDAP2Q9NXN4 497 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 TRPV2Q9Y5S1 764 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 DCDC2CA8MYV0 355 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 PAPSS1O43252 624 aaPredicted RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 ADAMTS4O75173 837 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 TRUB2O95900 331 aaKnown RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 RARGP13631 454 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 LCP1P13796 627 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 PRKAR2AP13861 404 aaKnown RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 ACAT1P24752 427 aaKnown RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 PNPLA4P41247 253 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 P3H1Q32P28 736 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 TMEM110Q86TL2 294 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 SERINC5Q86VE9 423 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 ADGRF2Q8IZF7 708 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 CLEC4CQ8WTT0 213 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 CAPS2Q9BXY5 557 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 NGRNQ9NPE2 291 aaKnown RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 AAASQ9NRG9 546 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 NOVA2Q9UNW9 492 aaKnown RBP10.92□□□□□ -0.66
HDAC9-210ENST00000428307 TRPM7Q96QT4 1865 aa10.92□□□□□ -0.66
HDAC9-210ENST00000428307 HMGB1P1B2RPK0 211 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CYB561D2O14569 222 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ACSL3O95573 720 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 NR1D1P20393 614 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ARSEP51690 589 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SLC6A3Q01959 620 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 MMRN1Q13201 1228 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SLMAPQ14BN4 828 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 PTGISQ16647 500 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SV2CQ496J9 727 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CCDC14Q49A88 953 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 WSCD1Q658N2 575 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 OLFML1Q6UWY5 402 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CRYBG2Q8N1P7 616 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 GSTCDQ8NEC7 633 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CMASQ8NFW8 434 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ACTL9Q8TC94 416 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 PPP1R10Q96QC0 940 aaKnown RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 DDX23Q9BUQ8 820 aaKnown RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 TRAIPQ9BWF2 469 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SENP6Q9GZR1 1112 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC9-210ENST00000428307 MIOSQ9NXC5 875 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 GRIN2DO15399 1336 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 SGK1O00141 431 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 RIPK2O43353 540 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 PRPSAP2O60256 369 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 CAND2O75155 1236 aa10.91□□□□□ -0.66
HDAC9-210ENST00000428307 ALDH1A1P00352 501 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms