RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CENPUQ71F23 418 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 USP17L1Q7RTZ2 530 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 COLGALT2Q8IYK4 626 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PIWIL2Q8TC59 973 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 KBTBD7Q8WVZ9 684 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PRR11Q96HE9 360 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 PARVGQ9HBI0 331 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MTMR4Q9NYA4 1195 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 TMEM9Q9P0T7 183 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ADAMTS6Q9UKP5 1117 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PCDHGB4Q9UN71 923 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PLLPQ9Y342 182 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PCDHGB5Q9Y5G0 923 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 LAMA1P25391 3075 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PLXNB3Q9ULL4 1909 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 HGSO14964 777 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 H6PDO95479 791 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 USP17L8P0C7I0 530 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PEX2P28328 305 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CETN2P41208 172 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ATP11CQ8NB49 1132 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 HAUS1Q96CS2 278 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF597Q96LX8 424 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MANSC1Q9H8J5 431 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF180Q9UJW8 692 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 DNM3Q9UQ16 869 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PTPN22Q9Y2R2 807 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PRSS51A0A1B0GVH4 220 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MEIS2O14770 477 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ITM2AO43736 263 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MAPTP10636 758 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 CYP11B1P15538 503 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 TNFAIP3P21580 790 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 RFC4P35249 363 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SNRPFP62306 86 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 PPP3CAQ08209 521 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CETN1Q12798 172 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PSMD6Q15008 389 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ANO5Q75V66 913 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SLF2Q8IX21 1173 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF564Q8TBZ8 553 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 OXNAD1Q96HP4 312 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 UNC45AQ9H3U1 944 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ITGA11Q9UKX5 1188 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 HBS1LQ9Y450 684 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 SVILO95425 2214 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PNMA6FA0A0J9YX94 578 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 A0A1W2PRG0 241 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 WTIPA6NIX2 430 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 PSTPIP1O43586 416 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SPAG6O75602 509 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 FBXO21O94952 628 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 YBX3P16989 372 aaKnown RBP eCLIP5.37□□□□□ -1.552e-8■■□□□ 12.3
RIF1-203ENST00000428287 GLRA2P23416 452 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 TTKP33981 857 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SREBF1P36956 1147 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CLPPQ16740 277 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 CCDC153Q494R4 210 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MMEL1Q495T6 779 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ENOSF1Q7L5Y1 443 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 DNAJC1Q96KC8 554 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 CNDP2Q96KP4 475 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 PCDHB18PQ96TA0 734 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 WWP1Q9H0M0 922 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 INIPQ9NRY2 104 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF652Q9Y2D9 606 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PLXNB1O43157 2135 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 NUP210Q8TEM1 1887 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 ATF2P15336 505 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 GYG1P46976 350 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 AQP4P55087 323 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 NUP107P57740 925 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PDE1BQ01064 536 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 GCNT1Q02742 428 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 HIF1AQ16665 826 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 TCERG1LQ5VWI1 586 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 IZUMO3Q5VZ72 239 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ACAD10Q6JQN1 1059 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 GJB7Q6PEY0 223 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CPNE8Q86YQ8 564 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MAP7D3Q8IWC1 876 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SLC7A14Q8TBB6 771 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MPP4Q96JB8 637 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CNDP1Q96KN2 507 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 FRMD8Q9BZ67 464 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 THEGQ9P2T0 379 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PCDHB2Q9Y5E7 798 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 RSPH10B2B2RC85 870 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 ZNF195O14628 629 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SPOPO43791 374 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SLITRK3O94933 977 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 PGM3O95394 542 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 NTSR2O95665 410 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 RSPH10BP0C881 870 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 CAMK2BQ13554 666 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 KRT81Q14533 505 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SPCS2Q15005 226 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 DCAF17Q5H9S7 520 aaPredicted RBP5.36□□□□□ -1.55
RIF1-203ENST00000428287 CYP4F22Q6NT55 531 aa5.36□□□□□ -1.55
RIF1-203ENST00000428287 SCAIQ8N9R8 606 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms