RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 USP4Q13107 963 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 LRRC32Q14392 662 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 GAS6Q14393 721 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 ZNF268Q14587 947 aaPredicted RBP19.6■□□□□ 0.73
PSPC1-202ENST00000427943 KCNB1Q14721 858 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 MTF1Q14872 753 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 C1orf220Q5T0J3 134 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 SV2AQ7L0J3 742 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 SMYD4Q8IYR2 804 aaPredicted RBP19.6■□□□□ 0.73
PSPC1-202ENST00000427943 B3GNT5Q9BYG0 378 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 ELOVL4Q9GZR5 314 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.6■□□□□ 0.733e-11■■■■■ 99.4
PSPC1-202ENST00000427943 FRYLO94915 3013 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 GVINP1Q7Z2Y8 2422 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 OTOL1A6NHN0 477 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-202ENST00000427943 AKAP3O75969 853 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 VAMP7P51809 220 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 PNOCQ13519 176 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 RUNX3Q13761 415 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 ZNF77Q15935 545 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 SPOPLQ6IQ16 392 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 CC2D1AQ6P1N0 951 aaPredicted RBP19.59■□□□□ 0.73
PSPC1-202ENST00000427943 FAM35AQ86V20 835 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 GUF1Q8N442 669 aaKnown RBP19.59■□□□□ 0.73
PSPC1-202ENST00000427943 C8orf48Q96LL4 319 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 IER2Q9BTL4 223 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 TTLL2Q9BWV7 592 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 GCNT4Q9P109 453 aa19.59■□□□□ 0.73
PSPC1-202ENST00000427943 HLA-DRAP01903 254 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 CCR3P51677 355 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 SATB1Q01826 763 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 ORC1Q13415 861 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 FAM186BQ8IYM0 893 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 ATRIPQ8WXE1 791 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 CHFRQ96EP1 664 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 CEP295NLQ96MC4 621 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 HINFPQ9BQA5 517 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 MED10Q9BTT4 135 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 MMRN2Q9H8L6 949 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 ZSCAN32Q9NX65 697 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 TRPM5Q9NZQ8 1165 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 HMGXB4Q9UGU5 601 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 PCDHGA2Q9Y5H1 932 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 WNT6Q9Y6F9 365 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 ZNF292O60281 2723 aa19.58■□□□□ 0.72
PSPC1-202ENST00000427943 OTOGLQ3ZCN5 2332 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 ABL1P00519 1130 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 TDGF1P13385 188 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 HDCP19113 662 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 GCLMP48507 274 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 NOP14P78316 857 aaKnown RBP19.57■□□□□ 0.72
PSPC1-202ENST00000427943 NFIL3Q16649 462 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 SGSM1Q2NKQ1 1148 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 ZCWPW2Q504Y3 356 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 DGKKQ5KSL6 1271 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 ACOT1Q86TX2 421 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 FMR1NBQ8N0W7 255 aaPredicted RBP19.57■□□□□ 0.72
PSPC1-202ENST00000427943 SUMF1Q8NBK3 374 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 ZBTB44Q8NCP5 570 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 SH3RF2Q8TEC5 729 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 NELL1Q92832 810 aa19.57■□□□□ 0.72
PSPC1-202ENST00000427943 EP300Q09472 2414 aaPredicted RBP19.57■□□□□ 0.72
PSPC1-202ENST00000427943 MYOFQ9NZM1 2061 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 ATP8B3O60423 1300 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 GOLGA6L4A6NEF3 574 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 IKBKBO14920 756 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 MAPK13O15264 365 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
PSPC1-202ENST00000427943 KRT13P13646 458 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 P4HA1P13674 534 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 ASPAP45381 313 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 CXCL12P48061 93 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 IFNAR2P48551 515 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 NDST1P52848 882 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 NUCB2P80303 420 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 PPP3CAQ08209 521 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 TAF10Q12962 218 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 CCINQ13939 588 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 PDGFRLQ15198 375 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 NAIF1Q69YI7 327 aaPredicted RBP19.56■□□□□ 0.72
PSPC1-202ENST00000427943 PAQR9Q6ZVX9 377 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 INTS8Q75QN2 995 aaKnown RBP19.56■□□□□ 0.72
PSPC1-202ENST00000427943 SPEM1Q8N4L4 309 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 EEF2KMTQ96G04 330 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 TNIP3Q96KP6 325 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 KCNK16Q96T55 309 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 C2orf42Q9NWW7 574 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 DUS2Q9NX74 493 aaKnown RBP19.56■□□□□ 0.72
PSPC1-202ENST00000427943 EHD2Q9NZN4 543 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 SPTBN4Q9H254 2564 aa19.56■□□□□ 0.72
PSPC1-202ENST00000427943 EML5Q05BV3 1969 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 ZNF840PA6NDX5 716 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 LILRB5O75023 590 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 CCDC130P13994 396 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 RPL13P26373 211 aaKnown RBP19.55■□□□□ 0.72
PSPC1-202ENST00000427943 ZXDBP98169 803 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 ADAM9Q13443 819 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 PPP2R5DQ14738 602 aa19.55■□□□□ 0.72
PSPC1-202ENST00000427943 DCLK2Q8N568 766 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms