RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CEPT1Q9Y6K0 416 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 LAMB4A4D0S4 1761 aa5.85□□□□□ -1.47
VTI1BP4-201ENST00000427516 MYH6P13533 1939 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ROBO3Q96MS0 1386 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ILVBLA1L0T0 632 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ERVV-2B6SEH9 535 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 FCHO1O14526 889 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 GIPC1O14908 333 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SLC22A2O15244 555 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DDX3YO15523 660 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 FOXO3O43524 673 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 XPOTO43592 962 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SPOPO43791 374 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CALUO43852 315 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DNAJB5O75953 348 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 MTA2O94776 668 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 H6PDO95479 791 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CRYZL1O95825 349 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 MYCP01106 439 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SERPINA6P08185 405 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CD48P09326 243 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 OR52Z1P0C646 297 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 POLR2MP0CAP2 368 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 XRCC5P13010 732 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ITGA4P13612 1032 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PLCG1P19174 1290 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SERPINB1P30740 379 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 NUDT1P36639 197 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ADCY8P40145 1251 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ALDH3B2P48448 385 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLK7P49862 253 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CASP5P51878 434 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PMS1P54277 932 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 AQP4P55087 323 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF200P98182 395 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KRT17Q04695 432 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PTK2Q05397 1052 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KCNH2Q12809 1159 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 STX3Q13277 289 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 EPHA7Q15375 998 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRIP13Q15645 432 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 OASLQ15646 514 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DGKDQ16760 1214 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ABCB5Q2M3G0 1257 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 NAALADL2Q58DX5 795 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PPP6R3Q5H9R7 873 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 RABGAP1LQ5R372 815 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 IFIT1BQ5T764 474 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 NDUFAF5Q5TEU4 345 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 AGAP7PQ5VUJ5 663 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SIGIRRQ6IA17 410 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 C16orf89Q6UX73 402 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CLEC4GQ6UXB4 293 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 RNF207Q6ZRF8 634 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 LRRC55Q6ZSA7 311 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PIK3AP1Q6ZUJ8 805 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 RAPH1Q70E73 1250 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF804AQ7Z570 1209 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ANKS1BQ7Z6G8 1248 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DCP2Q8IU60 420 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CRLF3Q8IUI8 442 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TBC1D10CQ8IV04 446 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TRIM59Q8IWR1 403 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KIAA2013Q8IYS2 634 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 BLIDQ8IZY5 108 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PQLC1Q8N2U9 271 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZCCHC9Q8N567 271 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KCTD17Q8N5Z5 321 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ESX1Q8N693 406 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PACRGLQ8N7B6 248 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ZNF713Q8N859 430 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ACTRT2Q8TDY3 377 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TNFRSF25Q93038 417 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TAMM41Q96BW9 452 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DCUN1D1Q96GG9 259 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KAZALD1Q96I82 304 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DNAJC1Q96KC8 554 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CYTH2Q99418 400 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 MYD88Q99836 296 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 NEURL2Q9BR09 285 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 THTPAQ9BU02 230 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TMEM120AQ9BXJ8 343 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 INO80BQ9C086 356 aaPredicted RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 MTFR1LQ9H019 292 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 KLHL25Q9H0H3 589 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 IRF2BPLQ9H1B7 796 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DHX33Q9H6R0 707 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 ANKHQ9HCJ1 492 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 DAPK2Q9UIK4 370 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 PCDHA4Q9UN74 947 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 TDRKHQ9Y2W6 561 aaKnown RBP5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 WASF2Q9Y6W5 498 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 LAMB1P07942 1786 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 SIGLEC1Q9BZZ2 1709 aa5.84□□□□□ -1.47
VTI1BP4-201ENST00000427516 CHD4Q14839 1912 aa5.84□□□□□ -1.48
VTI1BP4-201ENST00000427516 SCN4AP35499 1836 aa5.83□□□□□ -1.48
VTI1BP4-201ENST00000427516 NFASCO94856 1347 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms