RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 AGBL2Q5U5Z8 902 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 GRAMD1CQ8IYS0 662 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 FAM160A2Q8N612 972 aaPredicted RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 GPRASP2Q96D09 838 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RAD54BQ9Y620 910 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RHPN2P1A8MT19 583 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RPS6KA4O75676 772 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 CPP00450 1065 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 DSTNP60981 165 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 TWF1Q12792 350 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 PRPSAP1Q14558 356 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 BEND3Q5T5X7 828 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 KIF18BQ86Y91 864 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 SKA3Q8IX90 412 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 NELFCDQ8IXH7 590 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 KAT2AQ92830 837 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 POP5Q969H6 163 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 PGBD4Q96DM1 585 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 KCNS3Q9BQ31 491 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RNF32Q9H0A6 362 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RAB23Q9ULC3 237 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 GSTK1Q9Y2Q3 226 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 COPEO14579 308 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 NDUFB5O43674 189 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 KRT33AO76009 404 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 MAGOHP61326 146 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 PAK1Q13153 545 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 KMT5BQ4FZB7 885 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 DCUN1D2Q6PH85 259 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 MAGOHBQ96A72 148 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 FNBP1Q96RU3 617 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 TAF1DQ9H5J8 278 aaPredicted RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 NYAP2Q9P242 653 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 ZNF222Q9UK12 451 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 AURKCQ9UQB9 309 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 MINDY4BA8MYZ0 360 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 ATP5BP06576 529 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 MAP4K2Q12851 820 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 CDC73Q6P1J9 531 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 TMEM53Q6P2H8 277 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 LRIG3Q6UXM1 1119 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 MCUQ8NE86 351 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 ZNF671Q8TAW3 534 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 PIH1D2Q8WWB5 315 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 Q96MT0 163 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 TNKS2Q9H2K2 1166 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 POLKQ9UBT6 870 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RCOR1Q9UKL0 485 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 COL4A3BPQ9Y5P4 624 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RPRD2Q5VT52 1461 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 PCDHGA12O60330 932 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 IL18RAPO95256 599 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 SEC24AO95486 1093 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 ATXN1P54253 815 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 RPS7P62081 194 aaKnown RBP8.05□□□□□ -1.12
LINC00649-203ENST00000427447 DENND5AQ6IQ26 1287 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 ANKRD53Q8N9V6 530 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 ANKRD7Q92527 254 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 NSL1Q96IY1 281 aa8.05□□□□□ -1.12
LINC00649-203ENST00000427447 MYO1FO00160 1098 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CIITAP33076 1130 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 C4orf46Q504U0 113 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 AGAP9Q5VTM2 703 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PROSER2Q86WR7 435 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 THEMISQ8N1K5 641 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 C17orf53Q8N3J3 647 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 COMMD1Q8N668 190 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 DCLK3Q9C098 648 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CCDC88CQ9P219 2028 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 MAST1Q9Y2H9 1570 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 KPNA6O60684 536 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 BCAR3O75815 825 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 IPO13O94829 963 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PIGNO95427 931 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CSF2RAP15509 400 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 BEND4Q6ZU67 534 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 RHOUQ7L0Q8 258 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 FSTL5Q8N475 847 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 ACOT12Q8WYK0 555 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CYFIP2Q96F07 1278 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 MAF1Q9H063 256 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 HIPK2Q9H2X6 1198 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 EML4Q9HC35 981 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 RAB20Q9NX57 234 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 EIF4E1BA6NMX2 242 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 TTC34A8MYJ7 566 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 H3BRB1 525 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 IGF2BP3O00425 579 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 AP2A2O94973 939 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 ZDHHC11BP0C7U3 371 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 AFF1P51825 1210 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 TMEM132EQ6IEE7 984 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 SARM1Q6SZW1 724 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 YTHDF3Q7Z739 585 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 ZNF444Q8N0Y2 327 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 NEK6Q9HC98 313 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 BIN3Q9NQY0 253 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PDGFCQ9NRA1 345 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms