RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 RELL1Q8IUW5 271 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 IGDCC3Q8IVU1 814 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 KIF2BQ8N4N8 673 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 RSAD2Q8WXG1 361 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 MAF1Q9H063 256 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 SCN1AP35498 2009 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 ALOX15BO15296 676 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 MED7O43513 233 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 AVILO75366 819 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 FGFR1P11362 822 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 CDH6P55285 790 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 EIF3EP60228 445 aaKnown RBP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 TAP1Q03518 808 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 SLC1A5Q15758 541 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 HADHQ16836 314 aaKnown RBP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 KIZQ2M2Z5 673 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 FAXCQ5TGI0 409 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 C9orf131Q5VYM1 1079 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 TAPT1Q6NXT6 567 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 SCYL2Q6P3W7 929 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 MAMDC4Q6UXC1 1216 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 FAM183BPQ6ZVS7 135 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 BBS12Q6ZW61 710 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 FAM228AQ86W67 206 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 PRMT7Q9NVM4 692 aaPredicted RBP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
FIRRE-201ENST00000427391 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
FIRRE-201ENST00000427391 FAM47DPA6NHR8 397 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 IL18RAPO95256 599 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 TRUB2O95900 331 aaKnown RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 RBP3P10745 1247 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 KCNJ2P63252 427 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 TMEM132DQ14C87 1099 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ZC3H12AQ5D1E8 599 aaKnown RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 CYP4V2Q6ZWL3 525 aaPredicted RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 CENPUQ71F23 418 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 POLNQ7Z5Q5 900 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 FITM2Q8N6M3 262 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 SPATA18Q8TC71 538 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 RXFP2Q8WXD0 754 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 MPHOSPH6Q99547 160 aaKnown RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 B3GNT5Q9BYG0 378 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 SLC12A4Q9UP95 1085 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 CHMP2BQ9UQN3 213 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 WDR91A4D1P6 747 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 KRT7P08729 469 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ABHD2P08910 425 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 TFE3P19532 575 aaPredicted RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ADORA2AP29274 412 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 PTPN7P35236 360 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 CCDC142Q17RM4 750 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ACOT1Q86TX2 421 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ANKLE1Q8NAG6 615 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 FBXO36Q8NEA4 188 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 PYROXD1Q8WU10 500 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 MCRS1Q96EZ8 462 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ALG13Q9NP73 1137 aaKnown RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 SHOC2Q9UQ13 582 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 NME7Q9Y5B8 376 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 RNF8O76064 485 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 PFKMP08237 780 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 CA4P22748 312 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 PPIL2Q13356 520 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 CA9Q16790 459 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 ARHGEF18Q6ZSZ5 1173 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 C3orf62Q6ZUJ4 267 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 FBF1Q8TES7 1133 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 MRPL45Q9BRJ2 306 aaKnown RBP12.17□□□□□ -0.46
FIRRE-201ENST00000427391 UBN1Q9NPG3 1134 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 DPP3Q9NY33 737 aa12.17□□□□□ -0.46
FIRRE-201ENST00000427391 TSPAN1O60635 241 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 ASMTLO95671 621 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 OSBPP22059 807 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 ATXN1P54253 815 aaKnown RBP12.16□□□□□ -0.46
FIRRE-201ENST00000427391 XRCC4Q13426 336 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 ZNF268Q14587 947 aaPredicted RBP12.16□□□□□ -0.46
FIRRE-201ENST00000427391 PPP1R26Q5T8A7 1209 aaPredicted RBP12.16□□□□□ -0.46
FIRRE-201ENST00000427391 PMF1Q6P1K2 205 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 SCUBE3Q8IX30 993 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 C18orf25Q96B23 403 aaPredicted RBP12.16□□□□□ -0.46
FIRRE-201ENST00000427391 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
FIRRE-201ENST00000427391 CDHR5Q9HBB8 845 aa12.16□□□□□ -0.46
FIRRE-201ENST00000427391 NGRNQ9NPE2 291 aaKnown RBP12.16□□□□□ -0.46
FIRRE-201ENST00000427391 XPO7Q9UIA9 1087 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms