RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 HMMRO75330 724 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 CIAO1O76071 339 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 POMCP01189 267 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 RAP2AP10114 183 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 ZNF37AP17032 561 aaPredicted RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 ATP5JP18859 108 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 GCSHP23434 173 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 GUCY1A2P33402 732 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 PLA2G5P39877 138 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 GYS2P54840 703 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 PER3P56645 1201 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 CCT2P78371 535 aaKnown RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 OCA2Q04671 838 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 HNRNPA0Q13151 305 aaKnown RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 OTUD7BQ6GQQ9 843 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 FBXO46Q6PJ61 603 aaPredicted RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 KCNK18Q7Z418 384 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 NBPF5PQ86XG9 351 aaPredicted RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 BOLLQ8N9W6 283 aaKnown RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 FAM98AQ8NCA5 519 aaKnown RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 FBXO18Q8NFZ0 1043 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 HOXB13Q92826 284 aaPredicted RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 Q96MF0 132 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 PSMD1Q99460 953 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 ACE2Q9BYF1 805 aaPredicted RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 RWDD1Q9H446 243 aaPredicted RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 RSAD1Q9HA92 442 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 ALG13Q9NP73 1137 aaKnown RBP6.6□□□□□ -1.35
C9orf3-205ENST00000427193 TLK1Q9UKI8 766 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 COL4A5P29400 1685 aa6.6□□□□□ -1.35
C9orf3-205ENST00000427193 RBBP6Q7Z6E9 1792 aaKnown RBP6.59□□□□□ -1.35
C9orf3-205ENST00000427193 EYA2O00167 538 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 WNT10BO00744 389 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 BRINP1O60477 761 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 NPR1P16066 1061 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 CXADRP78310 365 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 LRCH2Q5VUJ6 765 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 CASKIN2Q8WXE0 1202 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 CCDC136Q96JN2 1154 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 ZSWIM1Q9BR11 485 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 SENP6Q9GZR1 1112 aaPredicted RBP6.59□□□□□ -1.35
C9orf3-205ENST00000427193 GALNT9Q9HCQ5 603 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 GPR108Q9NPR9 543 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 TBCCD1Q9NVR7 557 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 KCNE5Q9UJ90 142 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 HDAC9Q9UKV0 1011 aa6.59□□□□□ -1.35
C9orf3-205ENST00000427193 PA2G4Q9UQ80 394 aaKnown RBP6.59□□□□□ -1.35
C9orf3-205ENST00000427193 TEX33O43247 280 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 ENDOD1O94919 500 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 C1RP00736 705 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 FGFR2P21802 821 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 FAPQ12884 760 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 UBXN2BQ14CS0 331 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 CCDC152Q4G0S7 254 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 DLK2Q6UY11 383 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 Q6ZNX1 250 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 NOP9Q86U38 636 aaKnown RBP6.58□□□□□ -1.36
C9orf3-205ENST00000427193 KLHDC4Q8TBB5 520 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 TGFBRAP1Q8WUH2 860 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 CELF1Q92879 486 aaKnown RBP6.58□□□□□ -1.36
C9orf3-205ENST00000427193 RNF31Q96EP0 1072 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 DUSP26Q9BV47 211 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 PUS3Q9BZE2 481 aaKnown RBP6.58□□□□□ -1.36
C9orf3-205ENST00000427193 CAAP1Q9H8G2 361 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 ZBTB21Q9ULJ3 1066 aa6.58□□□□□ -1.36
C9orf3-205ENST00000427193 H0YGN5 161 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 GPANK1O95872 356 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 FGFR4P22455 802 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 SOX5P35711 763 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 IL15P40933 162 aaPredicted RBP6.57□□□□□ -1.36
C9orf3-205ENST00000427193 ALDH1A3P47895 512 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 PTH2RP49190 550 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 PPP3CAQ08209 521 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 MALLQ13021 153 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 IFIT5Q13325 482 aaKnown RBP6.57□□□□□ -1.36
C9orf3-205ENST00000427193 ZNF169Q14929 603 aaPredicted RBP6.57□□□□□ -1.36
C9orf3-205ENST00000427193 LRRC24Q50LG9 513 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 STRA8Q7Z7C7 330 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 CHD1LQ86WJ1 897 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 CMIPQ8IY22 773 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 KIF1BPQ96EK5 621 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 LRFN3Q9BTN0 628 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 ADI1Q9BV57 179 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 GBA2Q9HCG7 927 aaPredicted RBP6.57□□□□□ -1.36
C9orf3-205ENST00000427193 TMEM140Q9NV12 185 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 STAP2Q9UGK3 403 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 EXOC6BQ9Y2D4 811 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 TTC28Q96AY4 2481 aa6.57□□□□□ -1.36
C9orf3-205ENST00000427193 ANKRD18BA2A2Z9 1011 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 NPHP1O15259 732 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 SURF6O75683 361 aaKnown RBP6.56□□□□□ -1.36
C9orf3-205ENST00000427193 BBOX1O75936 387 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 MCAMP43121 646 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 GMPSP49915 693 aaPredicted RBP6.56□□□□□ -1.36
C9orf3-205ENST00000427193 RPS8P62241 208 aaKnown RBP6.56□□□□□ -1.36
C9orf3-205ENST00000427193 GRAPQ13588 217 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 CCDC57Q2TAC2 916 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 HSP90AB4PQ58FF6 505 aa6.56□□□□□ -1.36
C9orf3-205ENST00000427193 TOR2AQ5JU69 321 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms