RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 PIGHQ14442 188 aaPredicted RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 MGAT5BQ3V5L5 792 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 PDZK1Q5T2W1 519 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 ISLR2Q6UXK2 745 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 ATG16L2Q8NAA4 619 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 UTP15Q8TED0 518 aaKnown RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 DCUN1D5Q9BTE7 237 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 BARHL2Q9NY43 387 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 NQO1P15559 274 aaKnown RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 PTGER2P43116 358 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 CACHD1Q5VU97 1274 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 TRIQKQ629K1 86 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 SUGP1Q8IWZ8 645 aaKnown RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 USP13Q92995 863 aaPredicted RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 STK33Q9BYT3 514 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 ILKAPQ9H0C8 392 aaPredicted RBP13□□□□□ -0.33
HDLBP-214ENST00000427183 VIPAS39Q9H9C1 493 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 CTNNAL1Q9UBT7 734 aa13□□□□□ -0.33
HDLBP-214ENST00000427183 ASNA1O43681 348 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 CNOT3O75175 753 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 CLPTM1O96005 669 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.336e-8■■■□□ 15
HDLBP-214ENST00000427183 GRAPQ13588 217 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 CCNIQ14094 377 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 DENND1BQ6P3S1 775 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 SCUBE1Q8IWY4 988 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 RNASE11Q8TAA1 199 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 GRAPLQ8TC17 118 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 BLOC1S5Q8TDH9 187 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 EPS8L3Q8TE67 593 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 MED15Q96RN5 788 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 RAD21L1Q9H4I0 556 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 DDX18Q9NVP1 670 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 ZNF839A8K0R7 811 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 CYP2E1P05181 493 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 STX5Q13190 355 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 COMMD2Q86X83 199 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 IZUMO1Q8IYV9 350 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 RSPH1Q8WYR4 309 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 OTUD5Q96G74 571 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 PI4K2AQ9BTU6 479 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 RPS6KB2Q9UBS0 482 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 PRRG1O14668 218 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 SOAT2O75908 522 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 PTK6Q13882 451 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 TRIM48Q8IWZ4 208 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 FAM45AQ8TCE6 357 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 PAIP1Q9H074 479 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 STON1Q9Y6Q2 735 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 ALDH1A2O94788 518 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 ALOX12P18054 663 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 DALRD3Q5D0E6 543 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 CLEC17AQ6ZS10 378 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 TMEM79Q9BSE2 394 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 UNKQ9C0B0 810 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 MCM8Q9UJA3 840 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 PEX1O43933 1283 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 FAM20BO75063 409 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 IL12RB1P42701 662 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 FXR1P51114 621 aaKnown RBP eCLIP12.99□□□□□ -0.334e-6■■■□□ 15.6
HDLBP-214ENST00000427183 TMEM132DQ14C87 1099 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 NDUFA5Q16718 116 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 IZUMO2Q6UXV1 221 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 KRCC1Q9NPI7 259 aaPredicted RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 CHST12Q9NRB3 414 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 TRMT6Q9UJA5 497 aaKnown RBP12.99□□□□□ -0.33
HDLBP-214ENST00000427183 SH3BP1Q9Y3L3 701 aa12.99□□□□□ -0.33
HDLBP-214ENST00000427183 SNTNA6NMZ2 147 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 UCHL3P15374 230 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 AP3M2P53677 418 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 DENND5BQ6ZUT9 1274 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 METTL16Q86W50 562 aaKnown RBP12.98□□□□□ -0.33
HDLBP-214ENST00000427183 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 MT-CO1P00395 513 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 RBP3P10745 1247 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 FMO5P49326 533 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 CCT3P49368 545 aaKnown RBP12.98□□□□□ -0.33
HDLBP-214ENST00000427183 SERPINH1P50454 418 aaKnown RBP12.98□□□□□ -0.33
HDLBP-214ENST00000427183 GRM4Q14833 912 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 DGKDQ16760 1214 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 SYTL1Q8IYJ3 562 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 TSEN34Q9BSV6 310 aaKnown RBP12.98□□□□□ -0.33
HDLBP-214ENST00000427183 KLHL20Q9Y2M5 609 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 F5H6K3 240 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 H2AFYO75367 372 aaKnown RBP12.98□□□□□ -0.33
HDLBP-214ENST00000427183 KLRC3Q07444 240 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 SLC25A24Q6NUK1 477 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 LPCAT2Q7L5N7 544 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 C2orf69Q8N8R5 385 aa12.98□□□□□ -0.33
HDLBP-214ENST00000427183 RUBCNQ92622 972 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms