RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SEC31AO94979 1220 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 MYBL2P10244 700 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 RARAP10276 462 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 PCK1P35558 622 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SLC8A3P57103 927 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 COPS2P61201 443 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 FAAP100Q0VG06 881 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 TRNP1Q6NT89 227 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SLC26A9Q7LBE3 791 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 IFT20Q8IY31 132 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 COLGALT2Q8IYK4 626 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 RCOR2Q8IZ40 523 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 MYCBPAPQ8TBZ2 947 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 MAIP1Q8WWC4 291 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 KCTD13Q8WZ19 329 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 RBM41Q96IZ5 413 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 CNPY3Q9BT09 278 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 HIPK3Q9H422 1215 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 TBC1D13Q9NVG8 400 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 DDX56Q9NY93 547 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 PCYOX1Q9UHG3 505 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 TIMM13Q9Y5L4 95 aaPredicted RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 MKI67P46013 3256 aaKnown RBP15.97■□□□□ 0.15
ACTB-204ENST00000425660 ITGB1P05556 798 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 TYMPP19971 482 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 GPD1P21695 349 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 IBSPP21815 317 aaPredicted RBP15.97■□□□□ 0.15
ACTB-204ENST00000425660 PTPN7P35236 360 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 FLT3P36888 993 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 DHX34Q14147 1143 aaKnown RBP15.97■□□□□ 0.15
ACTB-204ENST00000425660 CCDC142Q17RM4 750 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 MDH1BQ5I0G3 518 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 CLEC20AQ6ZU45 233 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 ADAT2Q7Z6V5 191 aaKnown RBP15.97■□□□□ 0.15
ACTB-204ENST00000425660 PIGZQ86VD9 579 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 ZNF280BQ86YH2 543 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 PCED1BQ96HM7 432 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 FUT8Q9BYC5 575 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 LRRC19Q9H756 370 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 ASNSD1Q9NWL6 643 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 TSC2P49815 1807 aa15.97■□□□□ 0.15
ACTB-204ENST00000425660 MYBPHLA2RUH7 354 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 ZSCAN5CA6NGD5 496 aaPredicted RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 DCDC2CA8MYV0 355 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 PIK3R2O00459 728 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 KRT7P08729 469 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 SSR1P43307 286 aaKnown RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 BRCC3P46736 316 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 FNTAP49354 379 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 ATN1P54259 1190 aaPredicted RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 GUCY2DQ02846 1103 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 HADHQ16836 314 aaKnown RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 ATP13A4Q4VNC1 1196 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 PAN2Q504Q3 1202 aaKnown RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 TXNRD3NBQ6F5E7 133 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 FAM171BQ6P995 826 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 FBXO46Q6PJ61 603 aaPredicted RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 CTU1Q7Z7A3 348 aaKnown RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 AENQ8WTP8 325 aaKnown RBP15.96■□□□□ 0.15
ACTB-204ENST00000425660 RXFP2Q8WXD0 754 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.96■□□□□ 0.153e-8■■■■■ 63.7
ACTB-204ENST00000425660 ARMC5Q96C12 935 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 RUNDC3BQ96NL0 473 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 PKMYT1Q99640 499 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 HERPUD2Q9BSE4 406 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 OSBPL8Q9BZF1 889 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 EPB41L5Q9HCM4 733 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 TANC1Q9C0D5 1861 aa15.96■□□□□ 0.15
ACTB-204ENST00000425660 I3L4J1 428 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 CLDN5O00501 218 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 RNF8O76064 485 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 RALAP11233 206 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 PDGFRAP16234 1089 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 IL1R2P27930 398 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 DR1Q01658 176 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 TAF5Q15542 800 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 ANKS1BQ7Z6G8 1248 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 METTL23Q86XA0 190 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 SLCO2A1Q92959 643 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 SLITRK1Q96PX8 696 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 C11orf84Q9BUA3 381 aaPredicted RBP15.96■□□□□ 0.14
ACTB-204ENST00000425660 PCDHB7Q9Y5E2 793 aa15.96■□□□□ 0.14
ACTB-204ENST00000425660 FAM187AA6NFU0 413 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 F8W810 466 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 MAP2K7O14733 419 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 TTI1O43156 1089 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 BEST1O76090 585 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 FAM200BP0CF97 657 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 MIPP30301 263 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 CETN2P41208 172 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 TLE2Q04725 743 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 TAZQ16635 292 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 TCTN1Q2MV58 587 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 TRIM60Q495X7 471 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 CCDC14Q49A88 953 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 INTS6LQ5JSJ4 861 aaKnown RBP15.95■□□□□ 0.14
ACTB-204ENST00000425660 TTC27Q6P3X3 843 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 FAM35AQ86V20 835 aa15.95■□□□□ 0.14
ACTB-204ENST00000425660 CCDC50Q8IVM0 306 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms