RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 TRAFD1O14545 582 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TM9SF1O15321 606 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 OATP04181 439 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 POLR2BP30876 1174 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TUBP50607 506 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF132P52740 706 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 RCN2Q14257 317 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF699Q32M78 642 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ACSBG2Q5FVE4 666 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 FKBP1CQ5VVH2 108 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 PRAMEF18Q5VWM3 479 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 CIAPIN1Q6FI81 312 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF276Q8N554 614 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ALKBH8Q96BT7 664 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 NMRK1Q9NWW6 199 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TAS2R1Q9NYW7 299 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 DLGAP2Q9P1A6 1054 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TCRBV9S1A1TA0A576 114 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 TCRBV5S1A1TA0A578 114 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 A6NHS1 94 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 C3orf70A6NLC5 250 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 E7ENQ6 273 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 COPEO14579 308 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 NDC80O14777 642 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 SMIM24O75264 130 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 LSM8O95777 96 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 LMNAP02545 664 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 HMGCS2P54868 508 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 IRX4P78413 519 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 KLC1Q07866 573 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 FSTL1Q12841 308 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 THOC5Q13769 683 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 SGSM1Q2NKQ1 1148 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 XRRA1Q6P2D8 792 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 BBS12Q6ZW61 710 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ENDOVQ8N8Q3 282 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 UCMAQ8WVF2 138 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 WDR60Q8WVS4 1066 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 PRPF31Q8WWY3 499 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 FAF2Q96CS3 445 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 CDHR1Q96JP9 859 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 SYT15Q9BQS2 421 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 MECRQ9BV79 373 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF395Q9H8N7 513 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 PPARGC1AQ9UBK2 798 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 MTO1Q9Y2Z2 717 aaKnown RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 SLX4Q8IY92 1834 aa7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 COL2A1P02458 1487 aaPredicted RBP7.87□□□□□ -1.15
SMARCC1-202ENST00000425518 SPDYE5A6NIY4 337 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 B2RBV5 119 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 TRIM49D1C9J1S8 452 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 FCHO1O14526 889 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 RNF8O76064 485 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 EGFRP00533 1210 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 MYCNP04198 464 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ENO1P06733 434 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 MIPP30301 263 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PGM1P36871 562 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 VHLP40337 213 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CDK16Q00536 496 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 TAP1Q03518 808 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ENPEPQ07075 957 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CAPSQ13938 189 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CDO1Q16878 200 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 THEMIS2Q5TEJ8 643 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 EEPD1Q7L9B9 569 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PRPF39Q86UA1 669 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SCG3Q8WXD2 468 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 FAM161BQ96MY7 647 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ANKRD27Q96NW4 1050 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 RAB6BQ9NRW1 208 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CYTH4Q9UIA0 394 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 LNPEPQ9UIQ6 1025 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 THSD7AQ9UPZ6 1657 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 EME2A4GXA9 379 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SIGLEC16A6NMB1 481 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PPP1R12AO14974 1030 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PEX10O60683 326 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 EIF4BP23588 611 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ARL2P36404 184 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SERPINB4P48594 390 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CDH6P55285 790 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 TMPRSS15P98073 1019 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SLC25A11Q02978 314 aaKnown RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 KDSRQ06136 332 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CXCL9Q07325 125 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 GRIK3Q13003 919 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 RASA2Q15283 850 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 PPP1R15BQ5SWA1 713 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CDCA2Q69YH5 1023 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SCYL2Q6P3W7 929 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 BRSK2Q8IWQ3 736 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 NIM1KQ8IY84 436 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 SPDYE1Q8NFV5 336 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ZNF398Q8TD17 642 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 MZB1Q8WU39 189 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 ZBTB10Q96DT7 871 aa7.86□□□□□ -1.15
SMARCC1-202ENST00000425518 CPXM1Q96SM3 734 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms