RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 PDE6CP51160 858 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 USP46P62068 366 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 TNNC1P63316 161 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 CUL4BQ13620 913 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 KNOP1Q1ED39 458 aaKnown RBP18.93■□□□□ 0.62
GPC1-203ENST00000425056 EML3Q32P44 896 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 MDH1BQ5I0G3 518 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 SH3RF2Q8TEC5 729 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 EXOC4Q96A65 974 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 P2RY13Q9BPV8 354 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 XYLT2Q9H1B5 865 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 SNX25Q9H3E2 840 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 SLC39A2Q9NP94 309 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 EHD2Q9NZN4 543 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 WNT6Q9Y6F9 365 aa18.93■□□□□ 0.62
GPC1-203ENST00000425056 RNF40O75150 1001 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 HSP90AA1P07900 732 aaKnown RBP18.92■□□□□ 0.62
GPC1-203ENST00000425056 HDCP19113 662 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 ANXA13P27216 316 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 GNL1P36915 607 aaPredicted RBP18.92■□□□□ 0.62
GPC1-203ENST00000425056 AFMP43652 599 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 ATXN1P54253 815 aaKnown RBP18.92■□□□□ 0.62
GPC1-203ENST00000425056 NOP14P78316 857 aaKnown RBP18.92■□□□□ 0.62
GPC1-203ENST00000425056 WDR72Q3MJ13 1102 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 FBXO43Q4G163 708 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 NAIF1Q69YI7 327 aaPredicted RBP18.92■□□□□ 0.62
GPC1-203ENST00000425056 OR6B3Q8NGW1 331 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 ZNF516Q92618 1163 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 C8orf48Q96LL4 319 aa18.92■□□□□ 0.62
GPC1-203ENST00000425056 FBRSL1Q9HCM7 1045 aaKnown RBP18.92■□□□□ 0.62
GPC1-203ENST00000425056 F8VP50 259 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 ATICP31939 592 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 GALK1P51570 392 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 MYL6P60660 151 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 PKP1Q13835 747 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 CEP68Q76N32 757 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 FAM160A2Q8N612 972 aaPredicted RBP18.91■□□□□ 0.62
GPC1-203ENST00000425056 GOLGA5Q8TBA6 731 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 SYAP1Q96A49 352 aaPredicted RBP18.91■□□□□ 0.62
GPC1-203ENST00000425056 RTKNQ9BST9 563 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 ELOVL4Q9GZR5 314 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 DPEP3Q9H4B8 488 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 VRTNQ9H8Y1 702 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 SEMA4GQ9NTN9 838 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 TMEM30AQ9NV96 361 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 TRPM5Q9NZQ8 1165 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 CFAP45Q9UL16 551 aa18.91■□□□□ 0.62
GPC1-203ENST00000425056 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.91■□□□□ 0.62
GPC1-203ENST00000425056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.9■□□□□ 0.62
GPC1-203ENST00000425056 KLRC4O43908 158 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 EXOC3O60645 756 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 OLFM2O95897 454 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 SLFN14P0C7P3 912 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 PTPN1P18031 435 aaKnown RBP18.9■□□□□ 0.62
GPC1-203ENST00000425056 PPP3CCP48454 512 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 CACNA2D1P54289 1103 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 ZXDBP98169 803 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 TRPC3Q13507 836 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 CSRP2Q16527 193 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 GRAMD1CQ8IYS0 662 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 CEP57L1Q8IYX8 460 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 KIAA1958Q8N8K9 716 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 B3GALNT2Q8NCR0 500 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 TTC16Q8NEE8 873 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 PLEKHO2Q8TD55 490 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 GAB3Q8WWW8 586 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 EZH1Q92800 747 aaPredicted RBP18.9■□□□□ 0.62
GPC1-203ENST00000425056 CD101Q93033 1021 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 RCOR1Q9UKL0 485 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 SLC8A2Q9UPR5 921 aa18.9■□□□□ 0.62
GPC1-203ENST00000425056 ZNF840PA6NDX5 716 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 ACTN4O43707 911 aaKnown RBP18.89■□□□□ 0.61
GPC1-203ENST00000425056 NFATC1O95644 943 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 PXNP49023 591 aaPredicted RBP18.89■□□□□ 0.61
GPC1-203ENST00000425056 CASP4P49662 377 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 CLDN10P78369 228 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 SLC7A9P82251 487 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 DNM1Q05193 864 aaKnown RBP18.89■□□□□ 0.61
GPC1-203ENST00000425056 TDRD10Q5VZ19 366 aaKnown RBP18.89■□□□□ 0.61
GPC1-203ENST00000425056 PRR23CQ6ZRP0 262 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 CAMKK1Q8N5S9 505 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 KIAA0895Q8NCT3 520 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 NETO1Q8TDF5 533 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 PARD3BQ8TEW8 1205 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 TMEM174Q8WUU8 243 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 ZNF518BQ9C0D4 1074 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 NXF1Q9UBU9 619 aaKnown RBP18.89■□□□□ 0.61
GPC1-203ENST00000425056 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
GPC1-203ENST00000425056 SPTBN2O15020 2390 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 A8MXQ7 604 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 LEFTY2O00292 366 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 FOXD2O60548 495 aaPredicted RBP18.88■□□□□ 0.61
GPC1-203ENST00000425056 RPP40O75818 363 aaKnown RBP18.88■□□□□ 0.61
GPC1-203ENST00000425056 AKAP3O75969 853 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 OAS1P00973 400 aaKnown RBP18.88■□□□□ 0.61
GPC1-203ENST00000425056 AP3M2P53677 418 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 STK4Q13043 487 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 NR1H3Q13133 447 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 SYT13Q7L8C5 426 aa18.88■□□□□ 0.61
GPC1-203ENST00000425056 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms