RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ETNPPLQ8TBG4 499 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 TOE1Q96GM8 510 aaKnown RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 ZNF578Q96N58 590 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 SLC6A17Q9H1V8 727 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 IL25Q9H293 177 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 FZD8Q9H461 694 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 TMEM206Q9H813 350 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 UXTQ9UBK9 157 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 TUBGCP4Q9UGJ1 667 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 MAN2B2Q9Y2E5 1009 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 PCDHGA1Q9Y5H4 931 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 RBM8AQ9Y5S9 174 aaKnown RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 SNX11Q9Y5W9 270 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 PI4KAP42356 2102 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 STK36Q9NRP7 1315 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CBX4O00257 560 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 SLC9A3R1O14745 358 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 PRPF40AO75400 957 aaKnown RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 BAG4O95429 457 aaKnown RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CYP17A1P05093 508 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 MPOP05164 745 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 C1SP09871 688 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CSH1P0DML2 217 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CSH2P0DML3 217 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 ACADMP11310 421 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 ADH5P11766 374 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 HDCP19113 662 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 GRM5P41594 1212 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 MATR3P43243 847 aaKnown RBP eCLIP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 PDE6CP51160 858 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 C21orf59P57076 290 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 GABREP78334 506 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 ATP2C1P98194 919 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 PPP2R5AQ15172 486 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CDCA2Q69YH5 1023 aaPredicted RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 B3GNT9Q6UX72 402 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 FILIP1Q7Z7B0 1213 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 GATAD2AQ86YP4 633 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 LSMEM2Q8N112 164 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 THEM5Q8N1Q8 247 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 FAM26EQ8N5C1 309 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CEP120Q8N960 986 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 MCPH1Q8NEM0 835 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 PIGOQ8TEQ8 1089 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 IPO4Q8TEX9 1081 aaKnown RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 IFT74Q96LB3 600 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 FAM20AQ96MK3 541 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 ZMAT2Q96NC0 199 aaKnown RBP6.83□□□□□ -1.32
SDCBP-203ENST00000424270 DPH1Q9BZG8 443 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 CD93Q9NPY3 652 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 ANKEF1Q9NU02 776 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 VPS54Q9P1Q0 977 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 HSFX1Q9UBD0 423 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 VAV3Q9UKW4 847 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 ANKRD6Q9Y2G4 727 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 PCDHB6Q9Y5E3 794 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 RAD54BQ9Y620 910 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 COL6A6A6NMZ7 2263 aa6.83□□□□□ -1.32
SDCBP-203ENST00000424270 GOLGA4Q13439 2230 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 PTPRQQ9UMZ3 2332 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 A0A087WWV3 80 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 M0QZQ0 153 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SUV39H1O43463 412 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SLC37A4O43826 429 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 CCNT1O60563 726 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 ABL1P00519 1130 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 F11P03951 625 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SFTPCP11686 197 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 KCNE1P15382 129 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 EIF2DP41214 584 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 KIR2DL1P43626 348 aaPredicted RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 EFNA5P52803 228 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SPAG1Q07617 926 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 FUT2Q10981 343 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 STARD3Q14849 445 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 DHCR24Q15392 516 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 ANO4Q32M45 955 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 ZC2HC1CQ53FD0 456 aaPredicted RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SDHAF4Q5VUM1 108 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 DBX2Q6ZNG2 339 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 FAM124AQ86V42 546 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 CACUL1Q86Y37 369 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 EID2Q8N6I1 236 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 NSUN7Q8NE18 718 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 CADM4Q8NFZ8 388 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SPPL2BQ8TCT7 592 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 C2orf15Q8WU43 125 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SCFD1Q8WVM8 642 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 DNASE2BQ8WZ79 361 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 IGSF8Q969P0 613 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SLC22A12Q96S37 553 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 KIFC3Q9BVG8 833 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SLC26A6Q9BXS9 759 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 THSD1Q9NS62 852 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 RYDENQ9NUL5 291 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 SMPD4Q9NXE4 827 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 DEC1Q9P2X7 70 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 PCDHB5Q9Y5E4 795 aa6.82□□□□□ -1.32
SDCBP-203ENST00000424270 KIAA1549LQ6ZVL6 1849 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms