RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 UTP6Q9NYH9 597 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-208ENST00000422704 A0A087WZ62 844 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 E9PBE3 544 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 KLHL41O60662 606 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 SUPT7LO94864 414 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 ACAT1P24752 427 aaKnown RBP11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 OR1G1P47890 313 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 MARCKSL1P49006 195 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 NUDT2P50583 147 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 RPL10AP62906 217 aaKnown RBP11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 SEMA4DQ92854 862 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 STAMBPL1Q96FJ0 436 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 FDXACB1Q9BRP7 624 aaPredicted RBP11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 KCND2Q9NZV8 630 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 BCORQ6W2J9 1755 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 THSD7AQ9UPZ6 1657 aa11.02□□□□□ -0.64
SEMA4D-208ENST00000422704 ARHGEF37A1IGU5 675 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 NCF1BA6NI72 391 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ASB14A6NK59 587 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 NCF1CA8MVU1 366 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 OGTO15294 1046 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 JCHAINP01591 159 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 POLBP06746 335 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 NCF1P14598 390 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 BGNP21810 368 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 TGM2P21980 687 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 CXCL9Q07325 125 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 IL17AQ16552 155 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ZCCHC23Q6ZST2 131 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 SHCBP1Q8NEM2 672 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 FAM172AQ8WUF8 416 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ZNF606Q8WXB4 792 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 RXFP2Q8WXD0 754 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ROPN1BQ9BZX4 212 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 CAAP1Q9H8G2 361 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ROPN1Q9HAT0 212 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ANKEF1Q9NU02 776 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 DDX20Q9UHI6 824 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 TADA2AO75478 443 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 FDX1P10109 184 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 AP3M2P53677 418 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 AQP5P55064 265 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 UBE3AQ05086 875 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 PDAP1Q13442 181 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 LY6KQ17RY6 165 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 LLGL2Q6P1M3 1020 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ELOA2Q8IYF1 753 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 AGGF1Q8N302 714 aaeCLIP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 CYGBQ8WWM9 190 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 PAFAH2Q99487 392 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 SLC13A4Q9UKG4 626 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 PACSIN3Q9UKS6 424 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 CEP290O15078 2479 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 CBX6O95503 412 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 HNRNPCP07910 306 aaKnown RBP eCLIP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 VCAM1P19320 739 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 SPRP35270 261 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 PPP3CAQ08209 521 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 ZNF844Q08AG5 666 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 IYDQ6PHW0 289 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 BLOC1S5Q8TDH9 187 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 THAP11Q96EK4 314 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 CELF6Q96J87 481 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 APOL5Q9BWW9 433 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 SUFUQ9UMX1 484 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 SNX5Q9Y5X3 404 aa11.02□□□□□ -0.65
SEMA4D-208ENST00000422704 F8VP50 259 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 SERPIND1P05546 499 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 CHRM3P20309 590 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 FNTAP49354 379 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 DGKZQ13574 1117 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 DDX39BQ13838 428 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 TFDP3Q5H9I0 405 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 IER5Q5VY09 327 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 GRAMD4Q6IC98 578 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 CLEC4FQ8N1N0 589 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 EDEM1Q92611 657 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 NSL1Q96IY1 281 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 CEP19Q96LK0 163 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 LRRC4BQ9NT99 713 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 RIC1Q4ADV7 1423 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 ZNF263O14978 683 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 NDUFS3O75489 264 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 ETS1P14921 441 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 FUT11Q495W5 492 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 OTOP1Q7RTM1 612 aa11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 PRCCQ92733 491 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-208ENST00000422704 ZDHHC15Q96MV8 337 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms