RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 CDH8P55286 799 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 NOP14P78316 857 aaKnown RBP27.17■■□□□ 1.94
SMDT1-202ENST00000422252 KCNB1Q14721 858 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 MTF1Q14872 753 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 ZNF77Q15935 545 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 ZACNQ401N2 412 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 ARL14EPQ8N8R7 260 aaPredicted RBP27.17■■□□□ 1.94
SMDT1-202ENST00000422252 ZNF518BQ9C0D4 1074 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 TRPM5Q9NZQ8 1165 aa27.17■■□□□ 1.94
SMDT1-202ENST00000422252 IKBKBO14920 756 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 MAPK13O15264 365 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 RAP1GAPP47736 663 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 PDE6CP51160 858 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 SATB1Q01826 763 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 USP4Q13107 963 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 CCINQ13939 588 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 BECN1Q14457 450 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 PDGFRLQ15198 375 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 NFIL3Q16649 462 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 SGSM1Q2NKQ1 1148 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 SCARA5Q6ZMJ2 495 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 SYNPOQ8N3V7 929 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 RUBCNQ92622 972 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 HINFPQ9BQA5 517 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 B3GNT5Q9BYG0 378 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 MAPK8IP1Q9UQF2 711 aa27.16■■□□□ 1.94
SMDT1-202ENST00000422252 OTOL1A6NHN0 477 aaPredicted RBP27.15■■□□□ 1.94
SMDT1-202ENST00000422252 ARSAP15289 507 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 HDCP19113 662 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 CACNA2D1P54289 1103 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 Q6ZS52 159 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 SV2AQ7L0J3 742 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 GUF1Q8N442 669 aaKnown RBP27.15■■□□□ 1.94
SMDT1-202ENST00000422252 ELMO3Q96BJ8 720 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 TNIP3Q96KP6 325 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 TMEM30AQ9NV96 361 aa27.15■■□□□ 1.94
SMDT1-202ENST00000422252 ANAPC1Q9H1A4 1944 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 CLDN5O00501 218 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 P4HA1P13674 534 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 PFKLP17858 780 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 NR2F2P24468 414 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 PPP3CCP48454 512 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 AMPD2Q01433 879 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 TTC16Q8NEE8 873 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 OSCP1Q8WVF1 389 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 TAF4BQ92750 862 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 CCDC34Q96HJ3 373 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 SDCBP2Q9H190 292 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 EPC1Q9H2F5 836 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 DUS2Q9NX74 493 aaKnown RBP27.14■■□□□ 1.94
SMDT1-202ENST00000422252 ARHGAP26Q9UNA1 814 aa27.14■■□□□ 1.94
SMDT1-202ENST00000422252 ATP8B3O60423 1300 aa27.14■■□□□ 1.93
SMDT1-202ENST00000422252 TCF3P15923 654 aa27.13■■□□□ 1.93
SMDT1-202ENST00000422252 VAMP7P51809 220 aa27.13■■□□□ 1.93
SMDT1-202ENST00000422252 C1orf220Q5T0J3 134 aa27.13■■□□□ 1.93
SMDT1-202ENST00000422252 CPA6Q8N4T0 437 aa27.13■■□□□ 1.93
SMDT1-202ENST00000422252 SH3RF2Q8TEC5 729 aa27.13■■□□□ 1.93
SMDT1-202ENST00000422252 CHFRQ96EP1 664 aa27.13■■□□□ 1.93
SMDT1-202ENST00000422252 ZNF840PA6NDX5 716 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 TRDMT1O14717 391 aaKnown RBP27.12■■□□□ 1.93
SMDT1-202ENST00000422252 AKAP3O75969 853 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 PAPSS2O95340 614 aaPredicted RBP27.12■■□□□ 1.93
SMDT1-202ENST00000422252 PIK3CAP42336 1068 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 IFNAR2P48551 515 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 GRSF1Q12849 480 aaKnown RBP eCLIP27.12■■□□□ 1.931e-8■□□□□ 9.8
SMDT1-202ENST00000422252 TMEM196Q5HYL7 178 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 INTS8Q75QN2 995 aaKnown RBP27.12■■□□□ 1.93
SMDT1-202ENST00000422252 SLITRK1Q96PX8 696 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 MED10Q9BTT4 135 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 ECT2Q9H8V3 914 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 GVINP1Q7Z2Y8 2422 aa27.12■■□□□ 1.93
SMDT1-202ENST00000422252 ASS1P00966 412 aaKnown RBP27.11■■□□□ 1.93
SMDT1-202ENST00000422252 HLA-DRAP01903 254 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 RPL13P26373 211 aaKnown RBP27.11■■□□□ 1.93
SMDT1-202ENST00000422252 TAF10Q12962 218 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 FSTL4Q6MZW2 842 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 FAM35AQ86V20 835 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 NUP93Q8N1F7 819 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 ATP2A3Q93084 1043 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 SMG5Q9UPR3 1016 aaKnown RBP27.11■■□□□ 1.93
SMDT1-202ENST00000422252 WNT6Q9Y6F9 365 aa27.11■■□□□ 1.93
SMDT1-202ENST00000422252 KRT13P13646 458 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 GJA4P35212 333 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 IFRD2Q12894 506 aaPredicted RBP27.1■■□□□ 1.93
SMDT1-202ENST00000422252 ADAM9Q13443 819 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 EML3Q32P44 896 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 SPOPLQ6IQ16 392 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 PAQR9Q6ZVX9 377 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 ACOT1Q86TX2 421 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 FAM186BQ8IYM0 893 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 DCLK2Q8N568 766 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 KCNK16Q96T55 309 aa27.1■■□□□ 1.93
SMDT1-202ENST00000422252 EP300Q09472 2414 aaPredicted RBP27.1■■□□□ 1.93
SMDT1-202ENST00000422252 K7ESF4 209 aa27.09■■□□□ 1.93
SMDT1-202ENST00000422252 RTN3O95197 1032 aaPredicted RBP27.09■■□□□ 1.93
SMDT1-202ENST00000422252 ABL1P00519 1130 aa27.09■■□□□ 1.93
SMDT1-202ENST00000422252 TRIM49P0CI25 452 aa27.09■■□□□ 1.93
SMDT1-202ENST00000422252 TRIM49CP0CI26 452 aa27.09■■□□□ 1.93
SMDT1-202ENST00000422252 PSMC2P35998 433 aaKnown RBP27.09■■□□□ 1.93
SMDT1-202ENST00000422252 ASPAP45381 313 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms