RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 P3H4Q92791 437 aa13.98□□□□□ -0.17
MCF2L-213ENST00000421756 TMEM176AQ96HP8 235 aa13.98□□□□□ -0.17
MCF2L-213ENST00000421756 C12orf42Q96LP6 360 aa13.98□□□□□ -0.17
MCF2L-213ENST00000421756 PEBP4Q96S96 227 aa13.98□□□□□ -0.17
MCF2L-213ENST00000421756 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
MCF2L-213ENST00000421756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■■□ 24.3
MCF2L-213ENST00000421756 TTLL3Q9Y4R7 772 aa13.98□□□□□ -0.17
MCF2L-213ENST00000421756 COL11A1P12107 1806 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-213ENST00000421756 PMM2O15305 246 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 HMGCRP04035 888 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 CCDC130P13994 396 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ATP5DP30049 168 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 MSH2P43246 934 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 PIGHQ14442 188 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ZNF618Q5T7W0 954 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 PPP1R26Q5T8A7 1209 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 SPATS2Q86XZ4 545 aaKnown RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 CNPY4Q8N129 248 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 C3orf20Q8ND61 904 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 MRPL45Q9BRJ2 306 aaKnown RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 SMARCAD1Q9H4L7 1026 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 GRID1Q9ULK0 1009 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 MFHAS1Q9Y4C4 1052 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 STYXL1Q9Y6J8 313 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 LGALS2P05162 132 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 CPA2P48052 419 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ZNF200P98182 395 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 FAM183BPQ6ZVS7 135 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 HACE1Q8IYU2 909 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 GPC2Q8N158 579 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 CPT1BQ92523 772 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 UBN1Q9NPG3 1134 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 TIMM13Q9Y5L4 95 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 SOCS7O14512 581 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 UPP2O95045 317 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 IGFBP6P24592 240 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ADORA2AP29274 412 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ZBTB16Q05516 673 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 PMF1Q6P1K2 205 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 XYLT1Q86Y38 959 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 EIF2AQ9BY44 585 aaKnown RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 TMEM134Q9H6X4 195 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ZNF395Q9H8N7 513 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-213ENST00000421756 DPP3Q9NY33 737 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 PHTF1Q9UMS5 762 aa13.97□□□□□ -0.17
MCF2L-213ENST00000421756 UGT1A9O60656 530 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 RBL1P28749 1068 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 GRIA1P42261 906 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 GPX6P59796 221 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 EML3Q32P44 896 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 ACCSLQ4AC99 568 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 PAN2Q504Q3 1202 aaKnown RBP13.96□□□□□ -0.17
MCF2L-213ENST00000421756 UNC5BQ8IZJ1 945 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 PDIK1LQ8N165 341 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 FAM111AQ96PZ2 611 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 PAFAH2Q99487 392 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 ROPN1BQ9BZX4 212 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-213ENST00000421756 ROPN1Q9HAT0 212 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-213ENST00000421756 UGT1A7Q9HAW7 530 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 UGT1A10Q9HAW8 530 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 UGT1A8Q9HAW9 530 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 ACSS2Q9NR19 701 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 A8MXQ7 604 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 H3BRB1 525 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 ABCG1P45844 678 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 MCL1Q07820 350 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 FAM131BQ86XD5 332 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 PYROXD2Q8N2H3 581 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 FAM172AQ8WUF8 416 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 MECRQ9BV79 373 aa13.96□□□□□ -0.17
MCF2L-213ENST00000421756 TUT1Q9H6E5 874 aaKnown RBP13.96□□□□□ -0.17
MCF2L-213ENST00000421756 FAM189A1O60320 539 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 KRT16P08779 473 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 ICAM3P32942 547 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 GTF2A2P52657 109 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 STAT4Q14765 748 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 KBTBD12Q3ZCT8 623 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 TRNP1Q6NT89 227 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 LRRC6Q86X45 466 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 TCP10LQ8TDR4 215 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 FAM167AQ96KS9 214 aa13.96□□□□□ -0.18
MCF2L-213ENST00000421756 KBTBD13C9JR72 458 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 TAC1P20366 129 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ARL4CP56559 192 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 BCAR1P56945 870 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 CLDN10P78369 228 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 MGAT5Q09328 741 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 OLIG2Q13516 323 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ERO1BQ86YB8 467 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms