RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 C11orf49Q9H6J7 331 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 GTSE1Q9NYZ3 720 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 PPP1R3GB7ZBB8 358 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 AOC2O75106 756 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 ASGR1P07306 291 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 CYP11B1P15538 503 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 CCDC157Q569K6 752 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 HABP4Q5JVS0 413 aaKnown RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 MMEP08473 750 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 GFAPP14136 432 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 MAP2K2P36507 400 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 ERAP2Q6P179 960 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 EPM2AIP1Q7L775 607 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 ARHGEF38Q9NXL2 777 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 USP18Q9UMW8 372 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 AAR2Q9Y312 384 aaKnown RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 RASA4BC9J798 803 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 RASA4O43374 803 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 NCF2P19878 526 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 WASHC5Q12768 1159 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 GRIK3Q13003 919 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SPARCL1Q14515 664 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 ZRANB3Q5FWF4 1079 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 TFDP3Q5H9I0 405 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 IZUMO3Q5VZ72 239 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 ADCK2Q7Z695 626 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SERPINB11Q96P15 392 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 AGPAT5Q9NUQ2 364 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SLX4Q8IY92 1834 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 TMEM150BA6NC51 233 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 MAFO75444 373 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 PCDH8O95206 1070 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 GJB1P08034 283 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SESN2P58004 480 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 RCN2Q14257 317 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 TMEM119Q4V9L6 283 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 NAPEPLDQ6IQ20 393 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 MAML1Q92585 1016 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SENP1Q9P0U3 644 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 GNGT2O14610 69 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.18□□□□□ -0.62
PTCH1-206ENST00000421141 SNX24Q9Y343 169 aa11.18□□□□□ -0.62
PTCH1-206ENST00000421141 LOXHD1Q8IVV2 1947 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 WDR91A4D1P6 747 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 ACAD11Q709F0 780 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 LRRC8DQ7L1W4 858 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 GAS2L3Q86XJ1 694 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 ZNF507Q8TCN5 953 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 SENP8Q96LD8 212 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 ERGIC2Q96RQ1 377 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 PDGFCQ9NRA1 345 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 CRLS1Q9UJA2 301 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 LUC7L3O95232 432 aaKnown RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 SGCGQ13326 291 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 DDX42Q86XP3 938 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 PDZD8Q8NEN9 1154 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 PURBQ96QR8 312 aaKnown RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 GOLPH3Q9H4A6 298 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 COG4Q9H9E3 785 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 INTS13Q9NVM9 706 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 SERPIND1P05546 499 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 TYK2P29597 1187 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 RENBPP51606 427 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 TLE6Q9H808 572 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 CXCL14O95715 111 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 ATP5BP06576 529 aaKnown RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 POLR2EP19388 210 aaKnown RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 ZNF284Q2VY69 593 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 HP1BP3Q5SSJ5 553 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 KCNMB3Q9NPA1 279 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 TSPAN16Q9UKR8 245 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 PYGLP06737 847 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 POLBP06746 335 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 HADHAP40939 763 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 PTK6Q13882 451 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 FNDC3BQ53EP0 1204 aaKnown RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 DCLRE1AQ6PJP8 1040 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 SPATS2Q86XZ4 545 aaKnown RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 CORO1BQ9BR76 489 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 NCAM2O15394 837 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 NDUFS2O75306 463 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 GNGT1P63211 74 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 BRSK2Q8IWQ3 736 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 IL17RAQ96F46 866 aa11.17□□□□□ -0.62
PTCH1-206ENST00000421141 FRMD8P1Q9BZ68 369 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-206ENST00000421141 AKAP11Q9UKA4 1901 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 EML1O00423 815 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SPTLC1O15269 473 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 LAG3P18627 525 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SMARCB1Q12824 385 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 SLC25A41Q8N5S1 370 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 CNPY3Q9BT09 278 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 OXCT2Q9BYC2 517 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-206ENST00000421141 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
PTCH1-206ENST00000421141 ANP32DO95626 131 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms