RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 PPP1R2P3Q6NXS1 205 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 ERICH1Q86X53 443 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 PHF13Q86YI8 300 aaPredicted RBP13.19□□□□□ -0.3
TMEM53-206ENST00000420706 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 TCEAL8Q8IYN2 117 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 ACRBPQ8NEB7 543 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 KCTD13Q8WZ19 329 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 MRPL38Q96DV4 380 aaKnown RBP13.19□□□□□ -0.3
TMEM53-206ENST00000420706 HSFY1Q96LI6 401 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 C8orf48Q96LL4 319 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 CYP4F11Q9HBI6 524 aa13.19□□□□□ -0.3
TMEM53-206ENST00000420706 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
TMEM53-206ENST00000420706 REXO2Q9Y3B8 237 aaKnown RBP13.19□□□□□ -0.3
TMEM53-206ENST00000420706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.19□□□□□ -0.3
TMEM53-206ENST00000420706 ATG2AQ2TAZ0 1938 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 TRIM66O15016 1216 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PER2O15055 1255 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 SPATA31D3P0C874 917 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 NSFP46459 744 aaKnown RBP13.18□□□□□ -0.3
TMEM53-206ENST00000420706 GABRB2P47870 512 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 GPR15P49685 360 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 RGS7P49802 495 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 CLCN4P51793 760 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PDCLQ13371 301 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 SPA17Q15506 151 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 DDR2Q16832 855 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 HS1BP3Q53T59 392 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 SPATA31D4Q6ZUB0 917 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 TMEM110Q86TL2 294 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 MCOLN2Q8IZK6 566 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 KREMEN2Q8NCW0 462 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 SLC22A17Q8WUG5 538 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PPP1R13BQ96KQ4 1090 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 CPXM1Q96SM3 734 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 CYLDQ9NQC7 956 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 ADAM22Q9P0K1 906 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 TJP2Q9UDY2 1190 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 FBXW11Q9UKB1 542 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 PCDHA13Q9Y5I0 950 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
TMEM53-206ENST00000420706 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
TMEM53-206ENST00000420706 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 SOAT2O75908 522 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 GLUD1P00367 558 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 H2AFZP0C0S5 128 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 MMP8P22894 467 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 ACADSBP45954 432 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 GALCP54803 685 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
TMEM53-206ENST00000420706 KRT83P78385 493 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 DUSP6Q16828 381 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 C2CD6Q53TS8 623 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 RAB41Q5JT25 222 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 SDHAF4Q5VUM1 108 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 MMS22LQ6ZRQ5 1243 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 H2AFVQ71UI9 128 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 MON1BQ7L1V2 547 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
TMEM53-206ENST00000420706 C18orf8Q96DM3 657 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 VCPIP1Q96JH7 1222 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 SPATA17Q96L03 361 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 C11orf70Q9BRQ4 267 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 DESI2Q9BSY9 194 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 PACSIN1Q9BY11 444 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 TLE6Q9H808 572 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 LRRC4Q9HBW1 653 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 LMCD1Q9NZU5 365 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 PYCARDQ9ULZ3 195 aa13.17□□□□□ -0.3
TMEM53-206ENST00000420706 COL4A4P53420 1690 aaPredicted RBP13.17□□□□□ -0.3
TMEM53-206ENST00000420706 E5RJQ4 531 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 PIK3R2O00459 728 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
TMEM53-206ENST00000420706 ERBB2P04626 1255 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 CALB1P05937 261 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 LCP1P13796 627 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 ATF6P18850 670 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 SNX16P57768 344 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 C1QBPQ07021 282 aaKnown RBP13.16□□□□□ -0.3
TMEM53-206ENST00000420706 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
TMEM53-206ENST00000420706 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 CCDC149Q6ZUS6 474 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 GPRIN1Q7Z2K8 1008 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 NUP93Q8N1F7 819 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 MSANTD4Q8NCY6 345 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 GIPC2Q8TF65 315 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 HDAC7Q8WUI4 952 aa13.16□□□□□ -0.3
TMEM53-206ENST00000420706 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms