RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 RPP25Q9BUL9 199 aaKnown RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 GPR62Q9BZJ7 368 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 CHST11Q9NPF2 352 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 ST14Q9Y5Y6 855 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 PATE3B3GLJ2 98 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 B4E1Z4 1266 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 URODP06132 367 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 BCAR1P56945 870 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 MRPS21P82921 87 aaKnown RBP4.21□□□□□ -1.74
CNGA1-203ENST00000420489 GHRHRQ02643 423 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 ICA1Q05084 483 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 KIAA1755Q5JYT7 1200 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 PRAMEF13Q5VWM6 474 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 DPH6Q7L8W6 267 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 FBRSQ9HAH7 460 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 GPATCH2Q9NW75 528 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 ADAMTS6Q9UKP5 1117 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 PCDHA5Q9Y5H7 936 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 CREBBPQ92793 2442 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 KLK10O43240 276 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 SPRY1O43609 319 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-203ENST00000420489 STAM2O75886 525 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 GLDCP23378 1020 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 RESTQ13127 1097 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 DHX8Q14562 1220 aaKnown RBP4.21□□□□□ -1.74
CNGA1-203ENST00000420489 PAN2Q504Q3 1202 aaKnown RBP4.21□□□□□ -1.74
CNGA1-203ENST00000420489 LRRC55Q6ZSA7 311 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 ZSCAN18Q8TBC5 510 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-203ENST00000420489 SMARCD2Q92925 531 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 ZNF419Q96HQ0 510 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-203ENST00000420489 ALPK1Q96QP1 1244 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 ASPNQ9BXN1 380 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 EDARQ9UNE0 448 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 U3KQE9 123 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 DOPEY2Q9Y3R5 2298 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 CFAP46Q8IYW2 2715 aa4.21□□□□□ -1.74
CNGA1-203ENST00000420489 PIEZO2Q9H5I5 2752 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 PCNX2A6NKB5 2137 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ARHGEF37A1IGU5 675 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 LRRC10BA6NIK2 292 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TTC36A6NLP5 189 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ZNF217O75362 1048 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 CBX7O95931 251 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 CCNE1P24864 410 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TMPOP42166 694 aaKnown RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ACADVLP49748 655 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SEMG2Q02383 582 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 RUNX1T1Q06455 604 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 BMT2Q1RMZ1 405 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 UBE3DQ7Z6J8 389 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TSTD1Q8NFU3 115 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 CADM4Q8NFZ8 388 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SH3RF3Q8TEJ3 882 aaPredicted RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 RNF141Q8WVD5 230 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 STAG1Q8WVM7 1258 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 VCPIP1Q96JH7 1222 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ZNF512BQ96KM6 892 aaPredicted RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TMEM209Q96SK2 561 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SH3BP1Q9Y3L3 701 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 CNTNAP2Q9UHC6 1331 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SMIM35A0A1B0GVV1 85 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 E2F8A0AVK6 867 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 H3BS24 57 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 EXTL3O43909 919 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 GHRP10912 638 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TFE3P19532 575 aaPredicted RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ENDOUP21128 410 aaKnown RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ACP1P24666 158 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 RNF4P78317 190 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ST3GAL1Q11201 340 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TARDBPQ13148 414 aaKnown RBP eCLIP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 LAMB3Q13751 1172 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SEPT6Q14141 434 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 MVPQ14764 893 aaKnown RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 IGFBP7Q16270 282 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 BORAQ6PGQ7 559 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SPPL2CQ8IUH8 684 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 OXR1Q8N573 874 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 FBXO15Q8NCQ5 510 aaPredicted RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 PHC3Q8NDX5 983 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 WDR48Q8TAF3 677 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 C9orf43Q8TAL5 461 aaPredicted RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ENOX1Q8TC92 643 aaKnown RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 CYB5D2Q8WUJ1 264 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 KXD1Q9BQD3 176 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 ALG1Q9BT22 464 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 TM7SF3Q9NS93 570 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 MAGEC2Q9UBF1 373 aaPredicted RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 GABBR1Q9UBS5 961 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SAP30BPQ9UHR5 308 aaKnown RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 PADI3Q9ULW8 664 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 PCDHB5Q9Y5E4 795 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 CDY2AQ9Y6F7 541 aa4.2□□□□□ -1.74
CNGA1-203ENST00000420489 SPTAN1Q13813 2472 aaKnown RBP4.2□□□□□ -1.74
CNGA1-203ENST00000420489 WDR27A2RRH5 827 aa4.19□□□□□ -1.74
CNGA1-203ENST00000420489 SORBS3O60504 671 aa4.19□□□□□ -1.74
CNGA1-203ENST00000420489 CILPO75339 1184 aa4.19□□□□□ -1.74
CNGA1-203ENST00000420489 ZNF16P17020 682 aaPredicted RBP4.19□□□□□ -1.74
CNGA1-203ENST00000420489 SOX9P48436 509 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms