RNA–Protein interactions for RNA: ENST00000420246.6

TP53-204, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-204ENST00000420246 ACAP3Q96P50 834 aa12.55□□□□□ -0.4
TP53-204ENST00000420246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.4
TP53-204ENST00000420246 TSPAN16Q9UKR8 245 aa12.55□□□□□ -0.4
TP53-204ENST00000420246 BARX2Q9UMQ3 279 aaPredicted RBP12.55□□□□□ -0.4
TP53-204ENST00000420246 H3BRB1 525 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 RBP3P10745 1247 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 P4HA1P13674 534 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 RGS7P49802 495 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 EIF3EP60228 445 aaKnown RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 EFTUD2Q15029 972 aaKnown RBP eCLIP12.54□□□□□ -0.43e-8■■■■■ 33.6
TP53-204ENST00000420246 ZNF792Q3KQV3 632 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 SYCP2LQ5T4T6 812 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 OR6B2Q6IFH4 312 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 PPIL6Q8IXY8 311 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 RIBC1Q8N443 379 aaPredicted RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 NAT8LQ8N9F0 302 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 GPRC5AQ8NFJ5 357 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 SPATA18Q8TC71 538 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 RXFP2Q8WXD0 754 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 MAGEB18Q96M61 343 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 WDR83Q9BRX9 315 aaKnown RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 TRABDQ9H4I3 376 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.54□□□□□ -0.4
TP53-204ENST00000420246 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 CLUHO75153 1309 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 A0A1W2PPM1 405 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 TMEM63AO94886 807 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 APOC2P02655 101 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 ZNF143P52747 638 aaPredicted RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 CDH6P55285 790 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 RBP5P82980 135 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
TP53-204ENST00000420246 CGB2Q6NT52 195 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 PPP1R21Q6ZMI0 780 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 FAM47EQ6ZV65 393 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 FAM183BPQ6ZVS7 135 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 SHCBP1Q8NEM2 672 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 PYROXD1Q8WU10 500 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 KIF12Q96FN5 646 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 FAXDC2Q96IV6 333 aa12.54□□□□□ -0.4
TP53-204ENST00000420246 SBF1O95248 1867 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 A0A1B0GUA9 196 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 SUN1O94901 812 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 UBOX5O94941 541 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 PFKMP08237 780 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 TAC1P20366 129 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 MNAT1P51948 309 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 BASP1P80723 227 aaKnown RBP12.53□□□□□ -0.4
TP53-204ENST00000420246 ATP11AP98196 1134 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 INCA1Q0VD86 236 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 XRCC4Q13426 336 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 SNAPC2Q13487 334 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 MARCH8Q5T0T0 291 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 CYB5D1Q6P9G0 228 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 C3orf62Q6ZUJ4 267 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 CYP4V2Q6ZWL3 525 aaPredicted RBP12.53□□□□□ -0.4
TP53-204ENST00000420246 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 PCGF5Q86SE9 256 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 SPOCK2Q92563 424 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 ASNSD1Q9NWL6 643 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 C2CD4BA6NLJ0 364 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 PPEF2O14830 753 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 GPD1P21695 349 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 RPA3P35244 121 aaPredicted RBP12.53□□□□□ -0.4
TP53-204ENST00000420246 ARL4CP56559 192 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 C9orf131Q5VYM1 1079 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 LCLAT1Q6UWP7 414 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 SGSM3Q96HU1 749 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 NT5C1AQ9BXI3 368 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.53□□□□□ -0.4
TP53-204ENST00000420246 RABGEF1Q9UJ41 708 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
TP53-204ENST00000420246 MCF2LO15068 1137 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
TP53-204ENST00000420246 ASMTLO95671 621 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 SNAI1O95863 264 aaPredicted RBP12.52□□□□□ -0.41
TP53-204ENST00000420246 PCK1P35558 622 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 IL9RQ01113 521 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 NR1H3Q13133 447 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 BBS9Q3SYG4 887 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 ACOT1Q86TX2 421 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 DENND1AQ8TEH3 1009 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 SLC10A4Q96EP9 437 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
TP53-204ENST00000420246 SMC6Q96SB8 1091 aa12.52□□□□□ -0.41
TP53-204ENST00000420246 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms