RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ZNF318Q5VUA4 2279 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 A0A1W2PRU2 124 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 LGALS16A8MUM7 142 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 HHLA1C9JL84 531 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 RNF225M0QZC1 329 aaPredicted RBP19.77■□□□□ 0.76
PTCD3-204ENST00000418628 AP1G2O75843 785 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 CAVIN2O95810 425 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 GJA1P17302 382 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 FCARP24071 287 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 GABRR2P28476 465 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 WEE1P30291 646 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 CDC25CP30307 473 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 TEAD2Q15562 447 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 GJB7Q6PEY0 223 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 TMEM270Q6UE05 265 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 DENND5BQ6ZUT9 1274 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 SHC3Q92529 594 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 ZSWIM1Q9BR11 485 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 DNAI2Q9GZS0 605 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 TRPV4Q9HBA0 871 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 IGSF9Q9P2J2 1179 aa19.77■□□□□ 0.76
PTCD3-204ENST00000418628 UXTQ9UBK9 157 aaPredicted RBP19.77■□□□□ 0.76
PTCD3-204ENST00000418628 NCANO14594 1321 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 MYOFQ9NZM1 2061 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 SOBPA7XYQ1 873 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 BECN2A8MW95 431 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 O00370 1275 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 FAM200BP0CF97 657 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 NPR3P17342 541 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 ANXA13P27216 316 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 ADORA2BP29275 332 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 PTPN21Q16825 1174 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 PKDCCQ504Y2 493 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 STXBP5Q5T5C0 1151 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 RBBP8NLQ8NC74 664 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-204ENST00000418628 NXPE3Q969Y0 559 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 ZSWIM3Q96MP5 696 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 ASB16Q96NS5 453 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 MED10Q9BTT4 135 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 NAA15Q9BXJ9 866 aaKnown RBP19.76■□□□□ 0.75
PTCD3-204ENST00000418628 DUSP16Q9BY84 665 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 VPS16Q9H269 839 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 KCNK12Q9HB15 430 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 UBE2TQ9NPD8 197 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-204ENST00000418628 PLCB1Q9NQ66 1216 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 LIMD1Q9UGP4 676 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 MUTYHQ9UIF7 546 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 SIK3Q9Y2K2 1263 aa19.76■□□□□ 0.75
PTCD3-204ENST00000418628 SMTNL1A8MU46 457 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 ASGR2P07307 311 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 VDRP11473 427 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 RFX1P22670 979 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 TTC30AQ86WT1 665 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 TFAP2BQ92481 460 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 FGF14Q92915 247 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 HEXIM2Q96MH2 286 aaKnown RBP19.75■□□□□ 0.75
PTCD3-204ENST00000418628 GPR88Q9GZN0 384 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 GANQ9H2C0 597 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 CBX8Q9HC52 389 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 ZMYM5Q9UJ78 669 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 KIAA1257Q9ULG3 409 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 PCDHB4Q9Y5E5 795 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 F5P12259 2224 aa19.75■□□□□ 0.75
PTCD3-204ENST00000418628 PI4K2BG5E9Z4 385 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 SLC5A3P53794 718 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 MFAP3P55082 362 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 CYP4F8P98187 520 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 SGO2Q562F6 1265 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 FAM78AQ5JUQ0 283 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 KLHDC7AQ5VTJ3 777 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 PARM1Q6UWI2 310 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 MTSS1LQ765P7 747 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 GPRIN1Q7Z2K8 1008 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 NUP93Q8N1F7 819 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 ANKRD52Q8NB46 1076 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 MCRS1Q96EZ8 462 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 ERGIC2Q96RQ1 377 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 ATXN3LQ9H3M9 355 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 COMMD8Q9NX08 183 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 EHD2Q9NZN4 543 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 TSPAN16Q9UKR8 245 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 SORCS3Q9UPU3 1222 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 NUMBLQ9Y6R0 609 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 ZDBF2Q9HCK1 2354 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 KIAA1549LQ6ZVL6 1849 aa19.74■□□□□ 0.75
PTCD3-204ENST00000418628 DCXO43602 365 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 RTN3O95197 1032 aaPredicted RBP19.73■□□□□ 0.75
PTCD3-204ENST00000418628 DDX6P26196 483 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTCD3-204ENST00000418628 MAP3K7CLP57077 242 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 TAF12Q16514 161 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 MEA1Q16626 185 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 LCLAT1Q6UWP7 414 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 ANKRD20A12PQ8NF67 263 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 OVCA2Q8WZ82 227 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 SMARCD2Q92925 531 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 TASP1Q9H6P5 420 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 MAGED2Q9UNF1 606 aaPredicted RBP19.73■□□□□ 0.75
PTCD3-204ENST00000418628 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTCD3-204ENST00000418628 FHOD1Q9Y613 1164 aa19.73■□□□□ 0.75
PTCD3-204ENST00000418628 ECI2O75521 394 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms