RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 ADAM22Q9P0K1 906 aa12.56□□□□□ -0.4
GABRE-202ENST00000417300 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
GABRE-202ENST00000417300 TSPAN16Q9UKR8 245 aa12.56□□□□□ -0.4
GABRE-202ENST00000417300 DSEQ9UL01 958 aa12.56□□□□□ -0.4
GABRE-202ENST00000417300 EP300Q09472 2414 aaPredicted RBP12.56□□□□□ -0.4
GABRE-202ENST00000417300 M0QYV0 167 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 KIF4AO95239 1232 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 GPD2P43304 727 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 GSCP56915 257 aaPredicted RBP12.55□□□□□ -0.4
GABRE-202ENST00000417300 AMPD2Q01433 879 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 RNASELQ05823 741 aaKnown RBP12.55□□□□□ -0.4
GABRE-202ENST00000417300 SIGLEC14Q08ET2 396 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 TUBB2AQ13885 445 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 PTPROQ16827 1216 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 PKDCCQ504Y2 493 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 LIN9Q5TKA1 542 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 PAPD7Q5XG87 772 aaKnown RBP12.55□□□□□ -0.4
GABRE-202ENST00000417300 PLEKHA7Q6IQ23 1121 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 SYCE1Q8N0S2 351 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 MSANTD4Q8NCY6 345 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 UBE2Q2Q8WVN8 375 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 FAM193BQ96PV7 902 aaPredicted RBP12.55□□□□□ -0.4
GABRE-202ENST00000417300 TMEM175Q9BSA9 504 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 TUBB2BQ9BVA1 445 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 DPEP3Q9H4B8 488 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 OSGEPQ9NPF4 335 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 CLDND1Q9NY35 253 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 CTTNBP2NLQ9P2B4 639 aa12.55□□□□□ -0.4
GABRE-202ENST00000417300 ATMINO43313 823 aaPredicted RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 HCRTO43612 131 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 URI1O94763 535 aaPredicted RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 ATP1A1P05023 1023 aaKnown RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 RRM1P23921 792 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 LMO2P25791 158 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 BRCC3P46736 316 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 PTPN20Q4JDL3 420 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 PPP1R26Q5T8A7 1209 aaPredicted RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 C11orf63Q6NUN7 778 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
GABRE-202ENST00000417300 MMS22LQ6ZRQ5 1243 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 ERICH1Q86X53 443 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 LRRC43Q8N309 656 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 C12orf29Q8N999 325 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 B3GALNT2Q8NCR0 500 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 ZNF564Q8TBZ8 553 aaPredicted RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 MRPL38Q96DV4 380 aaKnown RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 NUP85Q9BW27 656 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 NRDE2Q9H7Z3 1164 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 DDX43Q9NXZ2 648 aaKnown RBP12.54□□□□□ -0.4
GABRE-202ENST00000417300 HESX1Q9UBX0 185 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 STRIP2Q9ULQ0 834 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 SCINQ9Y6U3 715 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 FAM208BQ5VWN6 2430 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 USP24Q9UPU5 2620 aa12.54□□□□□ -0.4
GABRE-202ENST00000417300 TCRBV5S1A1TA0A578 114 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 TBKBP1A7MCY6 615 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 BUB1BO60566 1050 aaPredicted RBP12.53□□□□□ -0.4
GABRE-202ENST00000417300 BAIAP3O94812 1187 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 ITGB1P05556 798 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 PRLRP16471 622 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 PTPN1P18031 435 aaKnown RBP12.53□□□□□ -0.4
GABRE-202ENST00000417300 PCSK1P29120 753 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 GABRB2P47870 512 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 OR1G1P47890 313 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 GATMP50440 423 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 BCAT1P54687 386 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 PDCLQ13371 301 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 CLUL1Q15846 466 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 PAN2Q504Q3 1202 aaKnown RBP12.53□□□□□ -0.4
GABRE-202ENST00000417300 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 METTL23Q86XA0 190 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 STK32AQ8WU08 396 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 HNRNPABQ99729 332 aaKnown RBP12.53□□□□□ -0.4
GABRE-202ENST00000417300 SYT15Q9BQS2 421 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 MIS12Q9H081 205 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 MRPL47Q9HD33 250 aaKnown RBP12.53□□□□□ -0.4
GABRE-202ENST00000417300 FAM49BQ9NUQ9 324 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 WDR35Q9P2L0 1181 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 CYTH4Q9UIA0 394 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 CDC23Q9UJX2 597 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 CDH9Q9ULB4 789 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 MRFAP1Q9Y605 127 aa12.53□□□□□ -0.4
GABRE-202ENST00000417300 FAM170AA1A519 330 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 ENC1O14682 589 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 SYN3O14994 580 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 MBTPS2O43462 519 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 DGKIO75912 1065 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 FTCDO95954 541 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 AMHP03971 560 aa12.52□□□□□ -0.41
GABRE-202ENST00000417300 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
GABRE-202ENST00000417300 BST2Q10589 180 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms