RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 GCNT4Q9P109 453 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 RAB23Q9ULC3 237 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 ATG13O75143 517 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 TCF3P15923 654 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 TRIM68Q6AZZ1 485 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 CPA6Q8N4T0 437 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 ARL14EPQ8N8R7 260 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-208ENST00000417285 OSCP1Q8WVF1 389 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 SLC22A12Q96S37 553 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 KCTD10Q9H3F6 313 aa26.99■■□□□ 1.91
VEGFA-208ENST00000417285 DUS2Q9NX74 493 aaKnown RBP26.99■■□□□ 1.91
VEGFA-208ENST00000417285 CASP4P49662 377 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 NR1H3Q13133 447 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 NCOA4Q13772 614 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 ZNF77Q15935 545 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 ZNF667Q5HYK9 610 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 TDRD10Q5VZ19 366 aaKnown RBP26.98■■□□□ 1.91
VEGFA-208ENST00000417285 KRBA2Q6ZNG9 492 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 Q6ZS52 159 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 LONP2Q86WA8 852 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 PLEKHO2Q8TD55 490 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 TMC2Q8TDI7 906 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 ATP2A3Q93084 1043 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 CCDC34Q96HJ3 373 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 ARHGAP26Q9UNA1 814 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 CEP250Q9BV73 2442 aa26.98■■□□□ 1.91
VEGFA-208ENST00000417285 C2orf78A6NCI8 922 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 OTOL1A6NHN0 477 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-208ENST00000417285 LRRIQ3A6PVS8 624 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-208ENST00000417285 F8VP50 259 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 IKBKBO14920 756 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 C4BPAP04003 597 aaKnown RBP26.97■■□□□ 1.91
VEGFA-208ENST00000417285 PRR29P0C7W0 189 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 P4HA1P13674 534 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 ARSAP15289 507 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 SGSM1Q2NKQ1 1148 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 ZNF699Q32M78 642 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 KIAA1958Q8N8K9 716 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 B3GALNT2Q8NCR0 500 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 GOLPH3LQ9H4A5 285 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 ECT2Q9H8V3 914 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 GDPD2Q9HCC8 539 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 FRMD4BQ9Y2L6 1034 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 CACNA1AO00555 2505 aa26.97■■□□□ 1.91
VEGFA-208ENST00000417285 K7ESF4 209 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 CALUO43852 315 aaPredicted RBP26.96■■□□□ 1.91
VEGFA-208ENST00000417285 RHOBTB3O94955 611 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 NR3C1P04150 777 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 DRD1P21728 446 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 IFNAR2P48551 515 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 USP46P62068 366 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 DPYDQ12882 1025 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 RIN3Q8TB24 985 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 SH3RF2Q8TEC5 729 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 TAF4BQ92750 862 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 TNIP3Q96KP6 325 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 B3GNT5Q9BYG0 378 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 GMEB2Q9UKD1 530 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 NME7Q9Y5B8 376 aa26.96■■□□□ 1.91
VEGFA-208ENST00000417285 DENND4CQ5VZ89 1909 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 ZNF840PA6NDX5 716 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 ZNF202O95125 648 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 GALK1P51570 392 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 USP4Q13107 963 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 FBXO43Q4G163 708 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 LAIR1Q6GTX8 287 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 FSTL4Q6MZW2 842 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 SLITRK1Q96PX8 696 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 P2RY13Q9BPV8 354 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 DPEP3Q9H4B8 488 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 TRAF3IP3Q9Y228 551 aa26.95■■□□□ 1.9
VEGFA-208ENST00000417285 ATP8B3O60423 1300 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 CHURC1-FNTBB4DL54 471 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 MAPK13O15264 365 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 SDHBP21912 280 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 GJA4P35212 333 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 FNTBP49356 437 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 NUCB2P80303 420 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 TTC16Q8NEE8 873 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 ZNF518BQ9C0D4 1074 aa26.94■■□□□ 1.9
VEGFA-208ENST00000417285 HRO43593 1189 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 CLSTN1O94985 981 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 RTN3O95197 1032 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-208ENST00000417285 VNN1O95497 513 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 CDH8P55286 799 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 SLC7A9P82251 487 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 SIM2Q14190 667 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-208ENST00000417285 PUM1Q14671 1186 aaKnown RBP eCLIP26.93■■□□□ 1.91e-7■■■□□ 15.4
VEGFA-208ENST00000417285 EML3Q32P44 896 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 ZACNQ401N2 412 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 CEP135Q66GS9 1140 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 NUP93Q8N1F7 819 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 CCDC26Q8TAB7 109 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 RMDN1Q96DB5 314 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 CHFRQ96EP1 664 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 SMYD3Q9H7B4 428 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 WNT6Q9Y6F9 365 aa26.93■■□□□ 1.9
VEGFA-208ENST00000417285 YWHAQP27348 245 aa26.92■■□□□ 1.9
VEGFA-208ENST00000417285 DLG4P78352 724 aa26.92■■□□□ 1.9
VEGFA-208ENST00000417285 TAF10Q12962 218 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms