RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 MDH1BQ5I0G3 518 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 FAM26FQ5R3K3 315 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 TDRD10Q5VZ19 366 aaKnown RBP12.12□□□□□ -0.47
SNX30-202ENST00000416585 FAM171BQ6P995 826 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 SYT13Q7L8C5 426 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 KBTBD6Q86V97 674 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 C11orf74Q86VG3 221 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 CBWD2Q8IUF1 395 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 TSTD1Q8NFU3 115 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 OR5B17Q8NGF7 314 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 FAM84AQ96KN4 292 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 PKMYT1Q99640 499 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 VPS45Q9NRW7 570 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 ARHGAP26Q9UNA1 814 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 MTMR6Q9Y217 621 aa12.12□□□□□ -0.47
SNX30-202ENST00000416585 ADAMTS9Q9P2N4 1935 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 PI4KAP42356 2102 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 ABCA7Q8IZY2 2146 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 HSP90AA1P07900 732 aaKnown RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 TCF3P15923 654 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 GNL1P36915 607 aaPredicted RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 LIMK1P53667 647 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 SNRPFP62306 86 aaKnown RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 CREB5Q02930 508 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 CCDC142Q17RM4 750 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 USP39Q53GS9 565 aaKnown RBP12.11□□□□□ -0.47
SNX30-202ENST00000416585 TRAPPC11Q7Z392 1133 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 DDX42Q86XP3 938 aaKnown RBP eCLIP12.11□□□□□ -0.47
SNX30-202ENST00000416585 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 XXYLT1Q8NBI6 393 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 MYCBPAPQ8TBZ2 947 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 KBTBD7Q8WVZ9 684 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 CCDC127Q96BQ5 260 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 PCED1BQ96HM7 432 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 SLC22A12Q96S37 553 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 TRIM9Q9C026 710 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 MAGEF1Q9HAY2 307 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 FAM13BQ9NYF5 915 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 GCNT4Q9P109 453 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 PTPRJQ12913 1337 aa12.11□□□□□ -0.47
SNX30-202ENST00000416585 FRYLO94915 3013 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 A8MXQ7 604 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 LEFTY2O00292 366 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 CLIC2O15247 247 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 CUTAO60888 179 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 ALDH1A2O94788 518 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 YEATS4O95619 227 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 MBL2P11226 248 aaPredicted RBP12.1□□□□□ -0.47
SNX30-202ENST00000416585 LMO2P25791 158 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 RAP1GAPP47736 663 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 SEC13P55735 322 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 BIRC3Q13489 604 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 WDR72Q3MJ13 1102 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 RNF43Q68DV7 783 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 LINC00301Q8NCQ3 95 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 PDZD8Q8NEN9 1154 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 CXorf38Q8TB03 319 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 RIN3Q8TB24 985 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
SNX30-202ENST00000416585 ZC3H10Q96K80 434 aaKnown RBP12.1□□□□□ -0.47
SNX30-202ENST00000416585 MED10Q9BTT4 135 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 FBRSL1Q9HCM7 1045 aaKnown RBP12.1□□□□□ -0.47
SNX30-202ENST00000416585 CRTAC1Q9NQ79 661 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
SNX30-202ENST00000416585 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
SNX30-202ENST00000416585 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
SNX30-202ENST00000416585 F8VP50 259 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 EXOC3O60645 756 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 TACC1O75410 805 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 RTN3O95197 1032 aaPredicted RBP12.09□□□□□ -0.47
SNX30-202ENST00000416585 ADH1CP00326 375 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 APODP05090 189 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 HOXC13P31276 330 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 ATICP31939 592 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 NOP14P78316 857 aaKnown RBP12.09□□□□□ -0.47
SNX30-202ENST00000416585 CYP24A1Q07973 514 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 PSMD6Q15008 389 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 PLK5Q496M5 336 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 C2orf27AQ580R0 203 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 STPG1Q5TH74 334 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 FILIP1Q7Z7B0 1213 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 CEP57L1Q8IYX8 460 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 GLIS3Q8NEA6 775 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 SPACA7Q96KW9 195 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 C8orf48Q96LL4 319 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
SNX30-202ENST00000416585 EDEM2Q9BV94 578 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 TPSD1Q9BZJ3 242 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 NACA2Q9H009 215 aa12.09□□□□□ -0.47
SNX30-202ENST00000416585 AGPAT3Q9NRZ7 376 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms