RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZACNQ401N2 412 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 FSTL4Q6MZW2 842 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 VSTM1Q6UX27 236 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 MAMSTRQ6ZN01 415 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 KRBA2Q6ZNG9 492 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 ARL14EPQ8N8R7 260 aaPredicted RBP16.11■□□□□ 0.17
UBXN4-203ENST00000416538 B3GALNT2Q8NCR0 500 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 GOLGA5Q8TBA6 731 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 SPATA17Q96L03 361 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 TTLL2Q9BWV7 592 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 B3GNT5Q9BYG0 378 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 KIF9Q9HAQ2 790 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 ZSCAN32Q9NX65 697 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 ZMYM5Q9UJ78 669 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 MAPK8IP1Q9UQF2 711 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 PCDHGA2Q9Y5H1 932 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 SDK1Q7Z5N4 2213 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 CACNA1AO00555 2505 aa16.11■□□□□ 0.17
UBXN4-203ENST00000416538 K7ESF4 209 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 KINO60870 393 aaKnown RBP16.1■□□□□ 0.17
UBXN4-203ENST00000416538 MYL1P05976 194 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 PTPN1P18031 435 aaKnown RBP16.1■□□□□ 0.17
UBXN4-203ENST00000416538 ATICP31939 592 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 GRIK1P39086 918 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 FAM160A1Q05DH4 1040 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 ORC1Q13415 861 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 TRPC3Q13507 836 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 ZCWPW2Q504Y3 356 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 SPOPLQ6IQ16 392 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 DENND5BQ6ZUT9 1274 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 PAQR9Q6ZVX9 377 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 EZH1Q92800 747 aaPredicted RBP16.1■□□□□ 0.17
UBXN4-203ENST00000416538 SYAP1Q96A49 352 aaPredicted RBP16.1■□□□□ 0.17
UBXN4-203ENST00000416538 IER2Q9BTL4 223 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 EPC1Q9H2F5 836 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 SNX25Q9H3E2 840 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 FBRSL1Q9HCM7 1045 aaKnown RBP16.1■□□□□ 0.17
UBXN4-203ENST00000416538 TRAF3IP3Q9Y228 551 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
UBXN4-203ENST00000416538 SOBPA7XYQ1 873 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 A8MXQ7 604 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 PHACTR2O75167 634 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 AKAP3O75969 853 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 CKMP06732 381 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 TRIM49P0CI25 452 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 TRIM49CP0CI26 452 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 ASPAP45381 313 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 RUNX3Q13761 415 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 MAPRE1Q15691 268 aaKnown RBP16.09■□□□□ 0.17
UBXN4-203ENST00000416538 CEP135Q66GS9 1140 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 SV2AQ7L0J3 742 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 FAM35AQ86V20 835 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 SMYD4Q8IYR2 804 aaPredicted RBP16.09■□□□□ 0.17
UBXN4-203ENST00000416538 C8orf48Q96LL4 319 aa16.09■□□□□ 0.17
UBXN4-203ENST00000416538 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.174e-8■■■■■ 32.6
UBXN4-203ENST00000416538 SMG5Q9UPR3 1016 aaKnown RBP16.09■□□□□ 0.17
UBXN4-203ENST00000416538 MYO18AQ92614 2054 aaKnown RBP16.09■□□□□ 0.17
UBXN4-203ENST00000416538 TRAV19A0A0A6YYK7 116 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 TRIM66O15016 1216 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 ZNF202O95125 648 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 OLFM2O95897 454 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 FAM163BP0C2L3 166 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 CCR3P51677 355 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 NOP14P78316 857 aaKnown RBP16.08■□□□□ 0.16
UBXN4-203ENST00000416538 PPP3CAQ08209 521 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 LRRC32Q14392 662 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 ZNF667Q5HYK9 610 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 TMEM196Q5HYL7 178 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 C1orf228Q6PIY5 440 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 SPEM1Q8N4L4 309 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 TTC16Q8NEE8 873 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 TMC2Q8TDI7 906 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 SH3RF2Q8TEC5 729 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 ELOVL4Q9GZR5 314 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
UBXN4-203ENST00000416538 RNF38Q9H0F5 515 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 POLR3BQ9NW08 1133 aaPredicted RBP16.08■□□□□ 0.16
UBXN4-203ENST00000416538 THG1LQ9NWX6 298 aaKnown RBP16.08■□□□□ 0.16
UBXN4-203ENST00000416538 ARHGAP26Q9UNA1 814 aa16.08■□□□□ 0.16
UBXN4-203ENST00000416538 DNAH14Q0VDD8 3507 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 ZNF840PA6NDX5 716 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 ANTXRLA6NF34 631 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 CHURC1-FNTBB4DL54 471 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 PAPSS2O95340 614 aaPredicted RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 ASS1P00966 412 aaKnown RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 OAS1P00973 400 aaKnown RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 EGFP01133 1207 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 HLA-DRAP01903 254 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 USP17L7P0C7H9 530 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 CCDC130P13994 396 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 NR2F2P24468 414 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 ANXA13P27216 316 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 GJA4P35212 333 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 FNTBP49356 437 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 IFRD2Q12894 506 aaPredicted RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 TAF10Q12962 218 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 SRSF5Q13243 272 aaKnown RBP16.07■□□□□ 0.16
UBXN4-203ENST00000416538 PNOCQ13519 176 aa16.07■□□□□ 0.16
UBXN4-203ENST00000416538 KCNB1Q14721 858 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms