RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 TCF3P15923 654 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 USP4Q13107 963 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 NCOA4Q13772 614 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 ZNF77Q15935 545 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 ZNF699Q32M78 642 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 TMEM196Q5HYL7 178 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 Q6ZS52 159 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 GPR161Q8N6U8 529 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 RIN3Q8TB24 985 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 TMC2Q8TDI7 906 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 CHAMP1Q96JM3 812 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 TTLL2Q9BWV7 592 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 ELOVL4Q9GZR5 314 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 DUS2Q9NX74 493 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 SPTBN4Q9H254 2564 aa18.74■□□□□ 0.59
PDLIM2-208ENST00000416159 A0A1W2PQ27 194 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 A0A1W2PQ64 194 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 A0A1W2PQD8 194 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 C2orf78A6NCI8 922 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 CLSTN1O94985 981 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 ARSAP15289 507 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 IFNAR2P48551 515 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 NDUFA8P51970 172 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 USP46P62068 366 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 NOP14P78316 857 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 CPA6Q8N4T0 437 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 B3GALNT2Q8NCR0 500 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 SH3RF2Q8TEC5 729 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 DPEP3Q9H4B8 488 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 ECT2Q9H8V3 914 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 RAB23Q9ULC3 237 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 ARHGAP26Q9UNA1 814 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 TRAF3IP3Q9Y228 551 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 FRMD4BQ9Y2L6 1034 aa18.73■□□□□ 0.59
PDLIM2-208ENST00000416159 OTOL1A6NHN0 477 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 K7ESF4 209 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 IKBKBO14920 756 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 RHOBTB3O94955 611 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 P4HA1P13674 534 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 HOXA6P31267 233 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 CNR2P34972 360 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 FOXK2Q01167 660 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 NR1H3Q13133 447 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 SGSM1Q2NKQ1 1148 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 FSTL4Q6MZW2 842 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 ATP2A3Q93084 1043 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 TNIP3Q96KP6 325 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 B3GNT5Q9BYG0 378 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 ZNF518BQ9C0D4 1074 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 SMYD3Q9H7B4 428 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 GMEB2Q9UKD1 530 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 ATP8B3O60423 1300 aa18.72■□□□□ 0.59
PDLIM2-208ENST00000416159 DMDP11532 3685 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 ZNF840PA6NDX5 716 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 CHURC1-FNTBB4DL54 471 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 CLDN5O00501 218 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 MAPK13O15264 365 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 ATG13O75143 517 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 VNN1O95497 513 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 DRD1P21728 446 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 GJA4P35212 333 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 FNTBP49356 437 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 GALK1P51570 392 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 CDH8P55286 799 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 DLG4P78352 724 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 DPYDQ12882 1025 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 ZACNQ401N2 412 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 LONP2Q86WA8 852 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 TTC16Q8NEE8 873 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 TAF4BQ92750 862 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 SLITRK1Q96PX8 696 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 P2RY13Q9BPV8 354 aa18.71■□□□□ 0.59
PDLIM2-208ENST00000416159 ATG2BQ96BY7 2078 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 RTN3O95197 1032 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 PRR29P0C7W0 189 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 SLC7A9P82251 487 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 TAF10Q12962 218 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 NFIL3Q16649 462 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 EML3Q32P44 896 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 FBXO43Q4G163 708 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 SV2AQ7L0J3 742 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 ERMP1Q7Z2K6 904 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 NUP93Q8N1F7 819 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 KIAA1958Q8N8K9 716 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 CHFRQ96EP1 664 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 CCDC34Q96HJ3 373 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 WNT6Q9Y6F9 365 aa18.7■□□□□ 0.58
PDLIM2-208ENST00000416159 ZNF202O95125 648 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 ABL1P00519 1130 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 RPL13P26373 211 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 YWHAQP27348 245 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 RAP1GAPP47736 663 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 VAMP7P51809 220 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 CACNA2D1P54289 1103 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 DMWDQ09019 674 aa18.69■□□□□ 0.58
PDLIM2-208ENST00000416159 LAIR1Q6GTX8 287 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms