RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 CDSNQ15517 529 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 GPR158Q5T848 1215 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 KLHDC10Q6PID8 442 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 SPRED1Q7Z699 444 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 ADGRD2Q7Z7M1 963 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 TAX1BP1Q86VP1 789 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 PALM2Q8IXS6 379 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 UBALD2Q8IYN6 164 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 BCL6BQ8N143 479 aaPredicted RBP6.04□□□□□ -1.44
CSTF1-202ENST00000415828 SHCBP1Q8NEM2 672 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 SH3RF3Q8TEJ3 882 aaPredicted RBP6.04□□□□□ -1.44
CSTF1-202ENST00000415828 MAP4K1Q92918 833 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 DPYSL5Q9BPU6 564 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 NOL10Q9BSC4 688 aaKnown RBP6.04□□□□□ -1.44
CSTF1-202ENST00000415828 ANO3Q9BYT9 981 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 PUF60Q9UHX1 559 aaKnown RBP6.04□□□□□ -1.44
CSTF1-202ENST00000415828 DNAI1Q9UI46 699 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 TSPYL4Q9UJ04 414 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 CDH22Q9UJ99 828 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSTF1-202ENST00000415828 SORCS3Q9UPU3 1222 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 TSC22D4Q9Y3Q8 395 aa6.04□□□□□ -1.44
CSTF1-202ENST00000415828 PATE3B3GLJ2 98 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 ELL2O00472 640 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 GRM6O15303 877 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 MAFGO15525 162 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 ZEB2O60315 1214 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 CDC14BO60729 498 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 MAFO75444 373 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 IQCF3P0C7M6 154 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 CLEC2LP0C7M8 214 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 PHC1P78364 1004 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 TMPRSS15P98073 1019 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 ZBTB41Q5SVQ8 909 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 FRMD7Q6ZUT3 714 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 KANSL1Q7Z3B3 1105 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 MAML2Q8IZL2 1156 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 PCSK9Q8NBP7 692 aaKnown RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 OSBPL5Q9H0X9 879 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 SEC61A2Q9H9S3 476 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 POLR3BQ9NW08 1133 aaPredicted RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 USP36Q9P275 1121 aaKnown RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 SYNPO2Q9UMS6 1093 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 APOBEC2Q9Y235 224 aaKnown RBP6.03□□□□□ -1.44
CSTF1-202ENST00000415828 MYH1P12882 1939 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 PLXNB3Q9ULL4 1909 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 PTPRQQ9UMZ3 2332 aa6.03□□□□□ -1.44
CSTF1-202ENST00000415828 ASTN1O14525 1302 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 CENPEQ02224 2701 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 APC2O95996 2303 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 TMEM8BA6NDV4 472 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 STRNO43815 780 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 KINO60870 393 aaKnown RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 DUSP11O75319 330 aaKnown RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 H2AFYO75367 372 aaKnown RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 ULK1O75385 1050 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 BAIAP3O94812 1187 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 CPEP16870 476 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 PICALMQ13492 652 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 CXorf67Q86X51 503 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 AFAP1L2Q8N4X5 818 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 ATL2Q8NHH9 583 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 SUSD6Q92537 303 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 GCDHQ92947 438 aaPredicted RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 WDR92Q96MX6 357 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 WWC2-AS2Q96NR7 200 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 UPF3AQ9H1J1 476 aaKnown RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 AS3MTQ9HBK9 375 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 ERVK-5Q9HDB9 667 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 NRBP1Q9UHY1 535 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 KCNG1Q9UIX4 513 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 OAZ3Q9UMX2 235 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 RBM8AQ9Y5S9 174 aaKnown RBP6.02□□□□□ -1.45
CSTF1-202ENST00000415828 TSC2P49815 1807 aa6.02□□□□□ -1.45
CSTF1-202ENST00000415828 PRSS38A1L453 326 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 BRINP1O60477 761 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 OPHN1O60890 802 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 DNAJC6O75061 913 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 ZNF623O75123 536 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 ENTPD3O75355 529 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 SNAI1O95863 264 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 FSHBP01225 129 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 IGKV5-2P06315 115 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 HNRNPLP14866 589 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 CR2P20023 1033 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 SESN2P58004 480 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 ATP2C1P98194 919 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 CAMK1Q14012 370 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 STAT4Q14765 748 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 SPECC1Q5M775 1068 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 RNF187Q5TA31 235 aaPredicted RBP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 IQSEC1Q6DN90 963 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 CATSPERGQ6ZRH7 1159 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 Q8TCH9 128 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 TBC1D22AQ8WUA7 517 aa6.01□□□□□ -1.45
CSTF1-202ENST00000415828 GFM2Q969S9 779 aaKnown RBP6.01□□□□□ -1.45
CSTF1-202ENST00000415828 HIST1H2AHQ96KK5 128 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms