RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 RAB23Q9ULC3 237 aa21.82■■□□□ 1.08
PTPRU-203ENST00000415600 IKBKBO14920 756 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 CKMP06732 381 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 P4HA1P13674 534 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 PFKLP17858 780 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 TRIM21P19474 475 aaKnown RBP21.81■■□□□ 1.08
PTPRU-203ENST00000415600 PPP3CCP48454 512 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 KCNB1Q14721 858 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 ISM2Q6H9L7 571 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 SARM1Q6SZW1 724 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 GPR161Q8N6U8 529 aaKnown RBP21.81■■□□□ 1.08
PTPRU-203ENST00000415600 GKN1Q9NS71 199 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 NCDNQ9UBB6 729 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 FRMD4BQ9Y2L6 1034 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 PATJQ8NI35 1801 aa21.81■■□□□ 1.08
PTPRU-203ENST00000415600 ATP8B3O60423 1300 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 CFAP54Q96N23 3096 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 SMTNL1A8MU46 457 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 LMO2P25791 158 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 SOX9P48436 509 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 DENND5BQ6ZUT9 1274 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 SLC9A9Q8IVB4 645 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 MLKLQ8NB16 471 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 TTC8Q8TAM2 541 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 TMEM174Q8WUU8 243 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 NELL1Q92832 810 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 GSDMAQ96QA5 445 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 ELOVL4Q9GZR5 314 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 DACH1Q9UI36 760 aa21.8■■□□□ 1.08
PTPRU-203ENST00000415600 FANCMQ8IYD8 2048 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 PDXKO00764 312 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 CALUO43852 315 aaPredicted RBP21.79■■□□□ 1.08
PTPRU-203ENST00000415600 CST3P01034 146 aaPredicted RBP21.79■■□□□ 1.08
PTPRU-203ENST00000415600 BMP6P22004 513 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 BDNFP23560 247 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 FOXK2Q01167 660 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 GRSF1Q12849 480 aaKnown RBP eCLIP21.79■■□□□ 1.08
PTPRU-203ENST00000415600 RUNX3Q13761 415 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 KMT5BQ4FZB7 885 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 PCED1BQ96HM7 432 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 FAM83CQ9BQN1 747 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 EPC1Q9H2F5 836 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 CRTAC1Q9NQ79 661 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 TRPM5Q9NZQ8 1165 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 NXF1Q9UBU9 619 aaKnown RBP21.79■■□□□ 1.08
PTPRU-203ENST00000415600 COL4A2P08572 1712 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 SPTBN4Q9H254 2564 aa21.79■■□□□ 1.08
PTPRU-203ENST00000415600 A8MXQ7 604 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 ATP2C2O75185 946 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 TNK2Q07912 1038 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 STK4Q13043 487 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 PON2Q15165 354 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 ZNF699Q32M78 642 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 ZNF667Q5HYK9 610 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 MDH1BQ5I0G3 518 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 TSSK4Q6SA08 328 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 CPA6Q8N4T0 437 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 SUMF1Q8NBK3 374 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 CCL26Q9Y258 94 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 HCRTO43612 131 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 KLRC4O43908 158 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 LILRB5O75023 590 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 PTPN1P18031 435 aaKnown RBP21.78■■□□□ 1.08
PTPRU-203ENST00000415600 MYL6P60660 151 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 NR1H3Q13133 447 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 CT47A1Q5JQC4 288 aaPredicted RBP21.78■■□□□ 1.08
PTPRU-203ENST00000415600 SCARA3Q6AZY7 606 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 TNIP3Q96KP6 325 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 C8orf48Q96LL4 319 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 MRPL45Q9BRJ2 306 aaKnown RBP21.78■■□□□ 1.08
PTPRU-203ENST00000415600 VRTNQ9H8Y1 702 aa21.78■■□□□ 1.08
PTPRU-203ENST00000415600 SMG5Q9UPR3 1016 aaKnown RBP21.78■■□□□ 1.08
PTPRU-203ENST00000415600 OTOGLQ3ZCN5 2332 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 ATG13O75143 517 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 NR3C1P04150 777 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 RPN1P04843 607 aaKnown RBP21.77■■□□□ 1.08
PTPRU-203ENST00000415600 IFNAR2P48551 515 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 TPM4P67936 248 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 NCOA4Q13772 614 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 MTF1Q14872 753 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 NCAPHQ15003 741 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 B3GALNT2Q8NCR0 500 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 KIAA0895Q8NCT3 520 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 STKLD1Q8NE28 680 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 PARD3BQ8TEW8 1205 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 ATP2A3Q93084 1043 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 DNAI2Q9GZS0 605 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 EBF3Q9H4W6 596 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 GMEB2Q9UKD1 530 aa21.77■■□□□ 1.08
PTPRU-203ENST00000415600 PAPSS2O95340 614 aaPredicted RBP21.76■■□□□ 1.07
PTPRU-203ENST00000415600 HDCP19113 662 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 CNR2P34972 360 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 ID4P47928 161 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF75DP51815 510 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 NOP14P78316 857 aaKnown RBP21.76■■□□□ 1.07
PTPRU-203ENST00000415600 CLDN10P78369 228 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 TDRD10Q5VZ19 366 aaKnown RBP21.76■■□□□ 1.07
PTPRU-203ENST00000415600 TXNDC11Q6PKC3 985 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 SLITRK1Q96PX8 696 aa21.76■■□□□ 1.07
PTPRU-203ENST00000415600 DMAC2Q9NW81 257 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms