RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 MAP3K7CLP57077 242 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 TUBB4BP68371 445 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 KRT17Q04695 432 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 CLUL1Q15846 466 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 SLC39A12Q504Y0 691 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 CCDC181Q5TID7 509 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 CLEC20AQ6ZU45 233 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 PIGZQ86VD9 579 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 SIX6OS1Q8N1H7 587 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 COLGALT1Q8NBJ5 622 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 MNS1Q8NEH6 495 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 OR10T2Q8NGX3 314 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 FNIP1Q8TF40 1166 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 C2orf15Q8WU43 125 aaKnown RBP15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 HES6Q96HZ4 224 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 FUBP3Q96I24 572 aaKnown RBP eCLIP15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 MCEEQ96PE7 176 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 OSBPL9Q96SU4 736 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 RC3H2Q9HBD1 1191 aaKnown RBP15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 PNPLA8Q9NP80 782 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 ASNSD1Q9NWL6 643 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 PCDHB5Q9Y5E4 795 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 NR2E3Q9Y5X4 410 aa15.01□□□□□ -0.01
HMGA1P1-201ENST00000415560 FANCGO15287 622 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 NCK2O43639 380 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 RNF8O76064 485 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 SOD2P04179 222 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 BDNFP23560 247 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 HTRA4P83105 476 aaPredicted RBP15□□□□□ -0.01
HMGA1P1-201ENST00000415560 AMPD2Q01433 879 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 PPP1R15BQ5SWA1 713 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 VSTM1Q6UX27 236 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 FAM183BPQ6ZVS7 135 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 LRRTM3Q86VH5 581 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 SCUBE3Q8IX30 993 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 SLC39A11Q8N1S5 342 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 BTBD6Q96KE9 485 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 RAD9AQ99638 391 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 PKMYT1Q99640 499 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 CSNK1G1Q9HCP0 422 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 DMAP1Q9NPF5 467 aaPredicted RBP15□□□□□ -0.01
HMGA1P1-201ENST00000415560 METTL5Q9NRN9 209 aaKnown RBP15□□□□□ -0.01
HMGA1P1-201ENST00000415560 HCSTQ9UBK5 93 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 ZMYND8Q9ULU4 1186 aaPredicted RBP15□□□□□ -0.01
HMGA1P1-201ENST00000415560 SSX2IPQ9Y2D8 614 aa15□□□□□ -0.01
HMGA1P1-201ENST00000415560 MRPL42Q9Y6G3 142 aaKnown RBP15□□□□□ -0.01
HMGA1P1-201ENST00000415560 DNAH12Q6ZR08 3092 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 TULP2O00295 520 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 KCNK3O14649 394 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 RIOK3O14730 519 aaKnown RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 TRIM66O15016 1216 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 CPB1P15086 417 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 GPD1P21695 349 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 PSMA2P25787 234 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 CTNNA2P26232 953 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 GRIK1P39086 918 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 PBX3P40426 434 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 CETN2P41208 172 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 SSR1P43307 286 aaKnown RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 RNASE9P60153 205 aaKnown RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 RPL7AP62424 266 aaKnown RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 GPR17Q13304 367 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 HADHQ16836 314 aaKnown RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 CFAP221Q4G0U5 840 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 LLGL2Q6P1M3 1020 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 ARCQ7LC44 396 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 TMCO2Q7Z6W1 182 aaPredicted RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 DDX53Q86TM3 631 aaKnown RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 RHOT1Q8IXI2 618 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 SPPL2BQ8TCT7 592 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 GOLGA1Q92805 767 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 ABHD8Q96I13 439 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 RPGRIP1Q96KN7 1286 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 TMEM209Q96SK2 561 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 SMOQ99835 787 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 CNGB3Q9NQW8 809 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 TJP2Q9UDY2 1190 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 PACSIN2Q9UNF0 486 aaPredicted RBP14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 USTQ9Y2C2 406 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 RWDD3Q9Y3V2 267 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 BACE2Q9Y5Z0 518 aa14.99□□□□□ -0.01
HMGA1P1-201ENST00000415560 VWA8A3KMH1 1905 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 CCDC85CA6NKD9 419 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 PIK3R2O00459 728 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 PAPSS1O43252 624 aaPredicted RBP14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 TLL1O43897 1013 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 BEST1O76090 585 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 GLI1P08151 1106 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 PDGFRAP16234 1089 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 ATP2A2P16615 1042 aaKnown RBP14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 RFC1P35251 1148 aaPredicted RBP14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 MAGEA11P43364 429 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 GLUD2P49448 558 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 TKTL1P51854 596 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 TERF1P54274 439 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 ARPP19P56211 112 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 RWDD2BP57060 319 aa14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 MRPS5P82675 430 aaKnown RBP14.98□□□□□ -0.01
HMGA1P1-201ENST00000415560 CREMQ03060 361 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms