RNA–Protein interactions for RNA: ENST00000414773.5

CLGN-202, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 2,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-202ENST00000414773 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
CLGN-202ENST00000414773 NIPA2Q8N8Q9 360 aa11.53□□□□□ -0.56
CLGN-202ENST00000414773 OR10T2Q8NGX3 314 aa11.53□□□□□ -0.56
CLGN-202ENST00000414773 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
CLGN-202ENST00000414773 RHOBTB2Q9BYZ6 727 aa11.53□□□□□ -0.56
CLGN-202ENST00000414773 DSEQ9UL01 958 aa11.53□□□□□ -0.56
CLGN-202ENST00000414773 TCRBV7S2A1N4TA0A589 114 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 XPO1O14980 1071 aaKnown RBP11.52□□□□□ -0.56
CLGN-202ENST00000414773 TADA2AO75478 443 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 FAM200BP0CF97 657 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 H2AFXP16104 143 aaPredicted RBP11.52□□□□□ -0.56
CLGN-202ENST00000414773 ITGB8P26012 769 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 PLA2G4AP47712 749 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 SLC8A3P57103 927 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 PLCB3Q01970 1234 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 KCTD19Q17RG1 926 aaPredicted RBP11.52□□□□□ -0.56
CLGN-202ENST00000414773 ZFYVE27Q5T4F4 411 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 TXNRD3NBQ6F5E7 133 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 C8orf74Q6P047 294 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 FAM35AQ86V20 835 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 ARFGAP1Q8N6T3 406 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 MYCBPAPQ8TBZ2 947 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 FNIP1Q8TF40 1166 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 RXFP2Q8WXD0 754 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 ACSF2Q96CM8 615 aaPredicted RBP11.52□□□□□ -0.56
CLGN-202ENST00000414773 ACBD6Q9BR61 282 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 DDX47Q9H0S4 455 aaKnown RBP11.52□□□□□ -0.56
CLGN-202ENST00000414773 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.56
CLGN-202ENST00000414773 NRP1O14786 923 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 AP1G2O75843 785 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 PDGFRAP16234 1089 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 PAX3P23760 479 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 PBX3P40426 434 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 CACNA2D1P54289 1103 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 SNX16P57768 344 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 VSNL1P62760 191 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 YWHAHQ04917 246 aaPredicted RBP11.52□□□□□ -0.57
CLGN-202ENST00000414773 INTS6LQ5JSJ4 861 aaKnown RBP11.52□□□□□ -0.57
CLGN-202ENST00000414773 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 CCDC50Q8IVM0 306 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 THEM5Q8N1Q8 247 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 NDRG1Q92597 394 aaKnown RBP11.52□□□□□ -0.57
CLGN-202ENST00000414773 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLGN-202ENST00000414773 MYLPFQ96A32 169 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 HSFY1Q96LI6 401 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 KCNK16Q96T55 309 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 NAP1L3Q99457 506 aaPredicted RBP11.52□□□□□ -0.57
CLGN-202ENST00000414773 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 TMEM30AQ9NV96 361 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 TMLHEQ9NVH6 421 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 DMGDHQ9UI17 866 aaKnown RBP11.52□□□□□ -0.57
CLGN-202ENST00000414773 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
CLGN-202ENST00000414773 C2CD4BA6NLJ0 364 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 NT5C1B-RDH14C9J2C7 533 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 TMEM189-UBE2V1I3L0A0 370 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 LRCH4O75427 683 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 TYMPP19971 482 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 GPD1P21695 349 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
CLGN-202ENST00000414773 ADIGQ0VDE8 80 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 IKBKEQ14164 716 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 C15orf59Q2T9L4 293 aaPredicted RBP11.51□□□□□ -0.57
CLGN-202ENST00000414773 CCDC70Q6NSX1 233 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 LRRTM3Q86VH5 581 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 SLC13A5Q86YT5 568 aaPredicted RBP11.51□□□□□ -0.57
CLGN-202ENST00000414773 ZDHHC14Q8IZN3 488 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 RNF25Q96BH1 459 aaPredicted RBP11.51□□□□□ -0.57
CLGN-202ENST00000414773 SMOQ99835 787 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 ARHGEF37A1IGU5 675 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 TRIM43BA6NCK2 446 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 HOXA2O43364 376 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 ACADSBP45954 432 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 SLC11A1P49279 550 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 CLCN6P51797 869 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 ZNF143P52747 638 aaPredicted RBP11.51□□□□□ -0.57
CLGN-202ENST00000414773 CDO1Q16878 200 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 RAB6CQ53S08 254 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 KATNAL2Q8IYT4 538 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 SPATA18Q8TC71 538 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 TRIM43Q96BQ3 446 aaPredicted RBP11.51□□□□□ -0.57
CLGN-202ENST00000414773 CFAP57Q96MR6 1250 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 HERPUD2Q9BSE4 406 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 PLVAPQ9BX97 442 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 RAB6CQ9H0N0 254 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 ZWILCHQ9H900 591 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 PCSK1NQ9UHG2 260 aa11.51□□□□□ -0.57
CLGN-202ENST00000414773 CCDC188H7C350 402 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
CLGN-202ENST00000414773 RAD51CO43502 376 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 ZRANB2O95218 330 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLGN-202ENST00000414773 ALDH2P05091 517 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 OR4Q2P0C623 313 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 BDNFP23560 247 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 IL1R2P27930 398 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 NDUFV1P49821 464 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 ATP11AP98196 1134 aa11.5□□□□□ -0.57
CLGN-202ENST00000414773 SMC1AQ14683 1233 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms