RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CYP17A1P05093 508 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 HOXD12P35452 270 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 DPP6P42658 865 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 FAM193AP78312 1265 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 MRPS21P82921 87 aaKnown RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 HMGN5P82970 282 aaKnown RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 ZXDBP98169 803 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 CUL4AQ13619 759 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 MAP7D1Q3KQU3 841 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 SOWAHCQ53LP3 525 aaPredicted RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 LMBRD2Q68DH5 695 aaPredicted RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 TTC30AQ86WT1 665 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 ALLCQ8N6M5 410 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 IL17RCQ8NAC3 791 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 TXNDC5Q8NBS9 432 aaKnown RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 LRRC15Q8TF66 581 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 INTS4Q96HW7 963 aaKnown RBP10.26□□□□□ -0.77
RFFL-203ENST00000413582 PARVGQ9HBI0 331 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 ANKRD63C9JTQ0 380 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 FAM13AO94988 1023 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 KLF8O95600 359 aaPredicted RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 CFIP05156 583 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 ITPKAP23677 461 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 ACAT1P24752 427 aaKnown RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 PNPLA4P41247 253 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 KIR2DL1P43626 348 aaPredicted RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 WNT7BP56706 349 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 ATP2C1P98194 919 aaPredicted RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 GTF2BQ00403 316 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 CFAP221Q4G0U5 840 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 HSF5Q4G112 596 aaPredicted RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 SPDYCQ5MJ68 293 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 ADALQ6DHV7 355 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 CRELD2Q6UXH1 353 aaPredicted RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 OSTM1Q86WC4 334 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 GPBP1Q86WP2 473 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 C12orf40Q86WS4 652 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 CHCHD4Q8N4Q1 142 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 MYCT1Q8N699 235 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 HMGB4Q8WW32 186 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 TMX3Q96JJ7 454 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 ACBD6Q9BR61 282 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 CAPN10Q9HC96 672 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 DDX43Q9NXZ2 648 aaKnown RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 AGO2Q9UKV8 859 aaKnown RBP10.25□□□□□ -0.77
RFFL-203ENST00000413582 STYXL1Q9Y6J8 313 aa10.25□□□□□ -0.77
RFFL-203ENST00000413582 URB1O60287 2271 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 GOLGA4Q13439 2230 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 VWA3AA6NCI4 1184 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 LEFTY2O00292 366 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 MAP3K13O43283 966 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 HCRTO43612 131 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 TRAK2O60296 914 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 ADAM23O75077 832 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 PDIA4P13667 645 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 PFKLP17858 780 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 HDCP19113 662 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 POLR2BP30876 1174 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 TIE1P35590 1138 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 EIF2DP41214 584 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 PDE6CP51160 858 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 POU5F1Q01860 360 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 SCAPQ12770 1279 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 DUOXA1Q1HG43 343 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 ZNF423Q2M1K9 1284 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 C19orf48Q6RUI8 117 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 FILIP1Q7Z7B0 1213 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 PDZD3Q86UT5 571 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 NT5DC4Q86YG4 428 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 SPATA2LQ8IUW3 424 aaPredicted RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 SCN4BQ8IWT1 228 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 TMEM86AQ8N2M4 240 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 HDDC3Q8N4P3 179 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 MINDY1Q8N5J2 469 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 KIAA1958Q8N8K9 716 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 C1orf127Q8N9H9 656 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 FSIP1Q8NA03 581 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 FAM184AQ8NB25 1140 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 OR2I1PQ8NGU4 316 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 CXorf38Q8TB03 319 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 SPATA18Q8TC71 538 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 FUBP3Q96I24 572 aaKnown RBP eCLIP10.24□□□□□ -0.77
RFFL-203ENST00000413582 CDK5RAP3Q96JB5 506 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 GTPBP2Q9BX10 602 aaKnown RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 IKZF4Q9H2S9 585 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
RFFL-203ENST00000413582 ZDHHC4Q9NPG8 344 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 BCCIPQ9P287 314 aaKnown RBP eCLIP10.24□□□□□ -0.77
RFFL-203ENST00000413582 GTF3C4Q9UKN8 822 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 SLC6A14Q9UN76 642 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 PTPRBP23467 1997 aa10.24□□□□□ -0.77
RFFL-203ENST00000413582 ASH1LQ9NR48 2969 aaKnown RBP10.23□□□□□ -0.77
RFFL-203ENST00000413582 TCRBV21S2A2A0A5A6 115 aa10.23□□□□□ -0.77
RFFL-203ENST00000413582 GABRDO14764 452 aa10.23□□□□□ -0.77
RFFL-203ENST00000413582 SCAMP3O14828 347 aaKnown RBP10.23□□□□□ -0.77
RFFL-203ENST00000413582 OPHN1O60890 802 aa10.23□□□□□ -0.77
RFFL-203ENST00000413582 HUS1O60921 280 aa10.23□□□□□ -0.77
RFFL-203ENST00000413582 KAT7O95251 611 aa10.23□□□□□ -0.77
RFFL-203ENST00000413582 IL18RAPO95256 599 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms