RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 B3GNT5Q9BYG0 378 aa16.69■□□□□ 0.26
MCF2L-211ENST00000413354 SDCBP2Q9H190 292 aa16.69■□□□□ 0.26
MCF2L-211ENST00000413354 TRPC7Q9HCX4 862 aa16.69■□□□□ 0.26
MCF2L-211ENST00000413354 TRPM5Q9NZQ8 1165 aa16.69■□□□□ 0.26
MCF2L-211ENST00000413354 MAN1B1Q9UKM7 699 aa16.69■□□□□ 0.26
MCF2L-211ENST00000413354 MYO16Q9Y6X6 1858 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 GADD45BO75293 160 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 RTN3O95197 1032 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 CKMP06732 381 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 CD72P21854 359 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 RPS9P46781 194 aaKnown RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 MRE11P49959 708 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 NDST1P52848 882 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 UBE2HP62256 183 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 INCA1Q0VD86 236 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 GPIHBP1Q8IV16 184 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 C1orf210Q8IVY1 113 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 TTC39CQ8N584 583 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 FBXL13Q8NEE6 735 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 FAM3CQ92520 227 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 USP13Q92995 863 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 CLDN23Q96B33 292 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 SLITRK1Q96PX8 696 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 IER2Q9BTL4 223 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 SMG9Q9H0W8 520 aaKnown RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 DMAP1Q9NPF5 467 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-211ENST00000413354 FAM86C1Q9NVL1 165 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 FANCMQ8IYD8 2048 aa16.68■□□□□ 0.26
MCF2L-211ENST00000413354 BICDL2A1A5D9 508 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 CLDN5O00501 218 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 DCAF17Q5H9S7 520 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 FOXR2Q6PJQ5 311 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 ACOT1Q86TX2 421 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 ALYREFQ86V81 257 aaKnown RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 RALGPS2Q86X27 583 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 NUP93Q8N1F7 819 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 CRYBG2Q8N1P7 616 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 PDZD8Q8NEN9 1154 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 ELMO3Q96BJ8 720 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 EEF2KMTQ96G04 330 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 CEP63Q96MT8 703 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 NT5C1AQ9BXI3 368 aa16.67■□□□□ 0.26
MCF2L-211ENST00000413354 FAM124BQ9H5Z6 455 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 APOBEC3GQ9HC16 384 aaKnown RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 METTL14Q9HCE5 456 aaKnown RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 ARMCX3Q9UH62 379 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 NDRG2Q9UN36 371 aaKnown RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 MTF2Q9Y483 593 aaPredicted RBP16.67■□□□□ 0.26
MCF2L-211ENST00000413354 TRIM49BA6NDI0 452 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 LRRN2O75325 713 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 AP1G2O75843 785 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 NBL1P41271 181 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 PMS1P54277 932 aaKnown RBP16.66■□□□□ 0.26
MCF2L-211ENST00000413354 USP46P62068 366 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 USP4Q13107 963 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 ITPRIPL2Q3MIP1 535 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 WDR44Q5JSH3 913 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 OVCA2Q8WZ82 227 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 ZFYVE19Q96K21 471 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.66■□□□□ 0.26
MCF2L-211ENST00000413354 KRT82Q9NSB4 513 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 SPATA6Q9NWH7 488 aaPredicted RBP16.66■□□□□ 0.26
MCF2L-211ENST00000413354 COMMD8Q9NX08 183 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 RAB20Q9NX57 234 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
MCF2L-211ENST00000413354 PROB1E7EW31 1015 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 LAMTOR5O43504 91 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 FAM200BP0CF97 657 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 TCF3P15923 654 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 YWHAQP27348 245 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 CTHP32929 405 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 CACNA2D1P54289 1103 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 MORC3Q14149 939 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 LRRC32Q14392 662 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 MTF1Q14872 753 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 PDGFRLQ15198 375 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 ISM2Q6H9L7 571 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 KLHL10Q6JEL2 608 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 ZC3H14Q6PJT7 736 aaKnown RBP16.65■□□□□ 0.26
MCF2L-211ENST00000413354 FUKQ8N0W3 1084 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 ARL14EPQ8N8R7 260 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-211ENST00000413354 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 FBXO32Q969P5 355 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 GKN1Q9NS71 199 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 TMEM30AQ9NV96 361 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 GCNT4Q9P109 453 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 HMGXB4Q9UGU5 601 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 ARHGAP26Q9UNA1 814 aa16.65■□□□□ 0.26
MCF2L-211ENST00000413354 C2orf78A6NCI8 922 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 ZNF840PA6NDX5 716 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 SHISA7A6NL88 538 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 CILPO75339 1184 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 CCDC130P13994 396 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 HDCP19113 662 aa16.64■□□□□ 0.25
MCF2L-211ENST00000413354 CD58P19256 250 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms