RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ZCWPW1Q9H0M4 648 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 METTL5Q9NRN9 209 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 TMEM30AQ9NV96 361 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 TMLHEQ9NVH6 421 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 LCMT1Q9UIC8 334 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 CDC23Q9UJX2 597 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 AMFRQ9UKV5 643 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 ALG6Q9Y672 507 aa7.01□□□□□ -1.29
VPS41-204ENST00000413141 MRPL42Q9Y6G3 142 aaKnown RBP7.01□□□□□ -1.29
VPS41-204ENST00000413141 CARNS1A5YM72 827 aa7□□□□□ -1.29
VPS41-204ENST00000413141 OR6C75A6NL08 312 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SIGLEC16A6NMB1 481 aa7□□□□□ -1.29
VPS41-204ENST00000413141 MIF4GDA9UHW6 222 aaKnown RBP7□□□□□ -1.29
VPS41-204ENST00000413141 MYO1FO00160 1098 aa7□□□□□ -1.29
VPS41-204ENST00000413141 PIK3R2O00459 728 aa7□□□□□ -1.29
VPS41-204ENST00000413141 DDX3YO15523 660 aaKnown RBP7□□□□□ -1.29
VPS41-204ENST00000413141 PAPSS1O43252 624 aaPredicted RBP7□□□□□ -1.29
VPS41-204ENST00000413141 SPOPO43791 374 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SRGAP2O75044 1071 aa7□□□□□ -1.29
VPS41-204ENST00000413141 GJB5O95377 273 aa7□□□□□ -1.29
VPS41-204ENST00000413141 OR4Q2P0C623 313 aa7□□□□□ -1.29
VPS41-204ENST00000413141 KRT3P12035 628 aa7□□□□□ -1.29
VPS41-204ENST00000413141 COMTP21964 271 aa7□□□□□ -1.29
VPS41-204ENST00000413141 CTNNA1P35221 906 aaKnown RBP7□□□□□ -1.29
VPS41-204ENST00000413141 SCNN1AP37088 669 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SLC1A1P43005 524 aa7□□□□□ -1.29
VPS41-204ENST00000413141 ACADSBP45954 432 aa7□□□□□ -1.29
VPS41-204ENST00000413141 DNA2P51530 1060 aa7□□□□□ -1.29
VPS41-204ENST00000413141 CDR1P51861 262 aa7□□□□□ -1.29
VPS41-204ENST00000413141 MAP3K7CLP57077 242 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SNX16P57768 344 aa7□□□□□ -1.29
VPS41-204ENST00000413141 HTRA4P83105 476 aaPredicted RBP7□□□□□ -1.29
VPS41-204ENST00000413141 OGDHQ02218 1023 aa7□□□□□ -1.29
VPS41-204ENST00000413141 RPS6KA1Q15418 735 aa7□□□□□ -1.29
VPS41-204ENST00000413141 WHAMMP3Q1A5X7 153 aa7□□□□□ -1.29
VPS41-204ENST00000413141 CTXN3Q4LDR2 81 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SLC39A12Q504Y0 691 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SPOUT1Q5T280 376 aaKnown RBP7□□□□□ -1.29
VPS41-204ENST00000413141 OR6B2Q6IFH4 312 aa7□□□□□ -1.29
VPS41-204ENST00000413141 DCUN1D2Q6PH85 259 aa7□□□□□ -1.29
VPS41-204ENST00000413141 KCNT2Q6UVM3 1135 aa7□□□□□ -1.29
VPS41-204ENST00000413141 C4orf50Q6ZRC1 276 aa7□□□□□ -1.29
VPS41-204ENST00000413141 LRRTM3Q86VH5 581 aa7□□□□□ -1.29
VPS41-204ENST00000413141 CEP57Q86XR8 500 aa7□□□□□ -1.29
VPS41-204ENST00000413141 ZDHHC17Q8IUH5 632 aa7□□□□□ -1.29
VPS41-204ENST00000413141 DCP1BQ8IZD4 617 aaKnown RBP7□□□□□ -1.29
VPS41-204ENST00000413141 SLC39A11Q8N1S5 342 aa7□□□□□ -1.29
VPS41-204ENST00000413141 NIPA2Q8N8Q9 360 aa7□□□□□ -1.29
VPS41-204ENST00000413141 COLGALT1Q8NBJ5 622 aa7□□□□□ -1.29
VPS41-204ENST00000413141 JOSD2Q8TAC2 188 aa7□□□□□ -1.29
VPS41-204ENST00000413141 GADD45GIP1Q8TAE8 222 aaPredicted RBP7□□□□□ -1.29
VPS41-204ENST00000413141 FNIP1Q8TF40 1166 aa7□□□□□ -1.29
VPS41-204ENST00000413141 CLEC4CQ8WTT0 213 aa7□□□□□ -1.29
VPS41-204ENST00000413141 COG1Q8WTW3 980 aa7□□□□□ -1.29
VPS41-204ENST00000413141 KCTD13Q8WZ19 329 aa7□□□□□ -1.29
VPS41-204ENST00000413141 HERVK_113Q902F9 699 aa7□□□□□ -1.29
VPS41-204ENST00000413141 HSFY1Q96LI6 401 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SLC9A7Q96T83 725 aa7□□□□□ -1.29
VPS41-204ENST00000413141 SMOQ99835 787 aa7□□□□□ -1.29
VPS41-204ENST00000413141 TTPALQ9BTX7 342 aa7□□□□□ -1.29
VPS41-204ENST00000413141 HERC2P3Q9BVR0 1158 aa7□□□□□ -1.29
VPS41-204ENST00000413141 CSNK1G1Q9HCP0 422 aa7□□□□□ -1.29
VPS41-204ENST00000413141 DMAP1Q9NPF5 467 aaPredicted RBP7□□□□□ -1.29
VPS41-204ENST00000413141 CXXC1Q9P0U4 656 aaPredicted RBP7□□□□□ -1.29
VPS41-204ENST00000413141 IP6K2Q9UHH9 426 aa7□□□□□ -1.29
VPS41-204ENST00000413141 ZMYND8Q9ULU4 1186 aaPredicted RBP7□□□□□ -1.29
VPS41-204ENST00000413141 CCDC66A2RUB6 948 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 HHLA1C9JL84 531 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 H7C4K7 107 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CES2O00748 559 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 DPYSL4O14531 572 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 KCNK3O14649 394 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 ZNF185O15231 689 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 TBC1D4O60343 1298 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 SLU7O95391 586 aaKnown RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 SOD2P04179 222 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 LINC00271P0C7V0 271 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 LCP1P13796 627 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 BDNFP23560 247 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 PSMA2P25787 234 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CTNNA2P26232 953 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CXCR5P32302 372 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 RFC1P35251 1148 aaPredicted RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 PPM1AP35813 382 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 FLT3P36888 993 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 MARCKSL1P49006 195 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 TKTL1P51854 596 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 NUBP1P53384 320 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 SLC6A3Q01959 620 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CKAP4Q07065 602 aaKnown RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 ADCY1Q08828 1119 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 ADIGQ0VDE8 80 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 PIGHQ14442 188 aaPredicted RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 NFE2Q16621 373 aaPredicted RBP6.99□□□□□ -1.29
VPS41-204ENST00000413141 USP41Q3LFD5 358 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 CFAP221Q4G0U5 840 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 RAB41Q5JT25 222 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 DCAF12L1Q5VU92 463 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 DAB2IPQ5VWQ8 1189 aa6.99□□□□□ -1.29
VPS41-204ENST00000413141 TRNP1Q6NT89 227 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms