RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ZSWIM1Q9BR11 485 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 RPP25Q9BUL9 199 aaKnown RBP13.97□□□□□ -0.17
HDAC8-210ENST00000412342 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 EPHX3Q9H6B9 360 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 DMAP1Q9NPF5 467 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-210ENST00000412342 IL37Q9NZH6 218 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 IGSF9Q9P2J2 1179 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 LIMA1Q9UHB6 759 aaKnown RBP13.97□□□□□ -0.17
HDAC8-210ENST00000412342 SORCS3Q9UPU3 1222 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 NUMBLQ9Y6R0 609 aa13.97□□□□□ -0.17
HDAC8-210ENST00000412342 HELZP42694 1942 aaKnown RBP13.97□□□□□ -0.17
HDAC8-210ENST00000412342 TRIOO75962 3097 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 TECTAO75443 2155 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 FAM92AA1XBS5 289 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 HHLA1C9JL84 531 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 ANXA13P27216 316 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 ADORA2BP29275 332 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 CDC25CP30307 473 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 CYP4F8P98187 520 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 IQCB1Q15051 598 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 NFKBIBQ15653 356 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 ZSCAN23Q3MJ62 389 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 FAM78AQ5JUQ0 283 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 NXPE3Q969Y0 559 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 JAKMIP2Q96AA8 810 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 MED10Q9BTT4 135 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 ATXN3LQ9H3M9 355 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 TRPV4Q9HBA0 871 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 APEX2Q9UBZ4 518 aa13.96□□□□□ -0.17
HDAC8-210ENST00000412342 MAGED2Q9UNF1 606 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-210ENST00000412342 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 BECN2A8MW95 431 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 O00370 1275 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 PAEPP09466 180 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 FAM200BP0CF97 657 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 ATP1A3P13637 1013 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 NPR3P17342 541 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 WEE1P30291 646 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 SLC5A3P53794 718 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 ZXDAP98168 799 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 TDGQ13569 410 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 TAF12Q16514 161 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 TMEM270Q6UE05 265 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 MTSS1LQ765P7 747 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 GPRIN1Q7Z2K8 1008 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 TTC30AQ86WT1 665 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 SLC44A3Q8N4M1 653 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 RBBP8NLQ8NC74 664 aaPredicted RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 ZSCAN18Q8TBC5 510 aaPredicted RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 SMARCD2Q92925 531 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 RSPRY1Q96DX4 576 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 PLA2G2FQ9BZM2 168 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 GPR88Q9GZN0 384 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 NAT10Q9H0A0 1025 aaKnown RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 UBE2TQ9NPD8 197 aaPredicted RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 C11orf16Q9NQ32 467 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 UXTQ9UBK9 157 aaPredicted RBP13.95□□□□□ -0.18
HDAC8-210ENST00000412342 PCDHB4Q9Y5E5 795 aa13.95□□□□□ -0.18
HDAC8-210ENST00000412342 SOBPA7XYQ1 873 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 ECI2O75521 394 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 VDRP11473 427 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 ALADP13716 330 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 TRIM21P19474 475 aaKnown RBP13.94□□□□□ -0.18
HDAC8-210ENST00000412342 ZNF165P49910 485 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 MAP3K7CLP57077 242 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 PKDCCQ504Y2 493 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 GPR158Q5T848 1215 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 TANGO2Q6ICL3 276 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 ENOSF1Q7L5Y1 443 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 SCAMP5Q8TAC9 235 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 SHC3Q92529 594 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 EDAQ92838 391 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 ELSPBP1Q96BH3 223 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 KXD1Q9BQD3 176 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 SLC46A2Q9BY10 475 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 DUSP16Q9BY84 665 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 VPS16Q9H269 839 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 TASP1Q9H6P5 420 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 PNPLA8Q9NP80 782 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 TSPAN16Q9UKR8 245 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 DUSP12Q9UNI6 340 aa13.94□□□□□ -0.18
HDAC8-210ENST00000412342 NARSO43776 548 aaKnown RBP13.93□□□□□ -0.18
HDAC8-210ENST00000412342 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 CALCAP01258 141 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 DDX6P26196 483 aaKnown RBP eCLIP13.93□□□□□ -0.18
HDAC8-210ENST00000412342 TAF10Q12962 218 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 GOLGA7BQ2TAP0 167 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 ARHGAP15Q53QZ3 475 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 SGO2Q562F6 1265 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 TXNDC8Q6A555 127 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 MON1AQ86VX9 555 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 ANKRD52Q8NB46 1076 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 FAM81BQ96LP2 452 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 LRRC3BQ96PB8 259 aa13.93□□□□□ -0.18
HDAC8-210ENST00000412342 GCNAQ96QF7 691 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms