RNA–Protein interactions for RNA: ENST00000412237.6

LYRM2-201, Transcript of LYR motif containing 2, humanhuman

TSL 1 (best)

Gene LYRM2, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-201ENST00000412237 ABI1Q8IZP0 508 aa11.91□□□□□ -0.5
LYRM2-201ENST00000412237 TSEN2Q8NCE0 465 aaKnown RBP11.91□□□□□ -0.5
LYRM2-201ENST00000412237 C3orf20Q8ND61 904 aa11.91□□□□□ -0.5
LYRM2-201ENST00000412237 FAM193BQ96PV7 902 aaPredicted RBP11.91□□□□□ -0.5
LYRM2-201ENST00000412237 TMEM191CA6NGB0 347 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 SRRM3A6NNA2 597 aaPredicted RBP11.9□□□□□ -0.5
LYRM2-201ENST00000412237 MIF4GDA9UHW6 222 aaKnown RBP11.9□□□□□ -0.5
LYRM2-201ENST00000412237 PIK3R2O00459 728 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 EBAG9O00559 213 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 CEP104O60308 925 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 PROSCO94903 275 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 ITGB1P05556 798 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 SETSIPP0DME0 302 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 GABRB2P47870 512 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 LHX1P48742 406 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 RNASE9P60153 205 aaKnown RBP11.9□□□□□ -0.5
LYRM2-201ENST00000412237 RPL7AP62424 266 aaKnown RBP11.9□□□□□ -0.5
LYRM2-201ENST00000412237 GUCY2DQ02846 1103 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 CUL1Q13616 776 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 ZNF268Q14587 947 aaPredicted RBP11.9□□□□□ -0.5
LYRM2-201ENST00000412237 CCDC142Q17RM4 750 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 PPP1R15BQ5SWA1 713 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
LYRM2-201ENST00000412237 KIAA0319Q5VV43 1072 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 DCUN1D2Q6PH85 259 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 LRIG3Q6UXM1 1119 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 KDM7AQ6ZMT4 941 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 METTL23Q86XA0 190 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 UBL4BQ8N7F7 174 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 ANKRD52Q8NB46 1076 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 SLC2A14Q8TDB8 520 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 RSPH1Q8WYR4 309 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 KRT35Q92764 455 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 ZIM3Q96PE6 472 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 MCEEQ96PE7 176 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 SYT15Q9BQS2 421 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 EPB41L5Q9HCM4 733 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 WDR35Q9P2L0 1181 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 TMEM59LQ9UK28 342 aa11.9□□□□□ -0.5
LYRM2-201ENST00000412237 M0QZQ0 153 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 PAX3P23760 479 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 TKTP29401 623 aaKnown RBP11.9□□□□□ -0.51
LYRM2-201ENST00000412237 OR1G1P47890 313 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 MARCKSL1P49006 195 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 TAP1Q03518 808 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.51
LYRM2-201ENST00000412237 TTMPQ5BVD1 217 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 MDH1BQ5I0G3 518 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 EMC10Q5UCC4 262 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 PMF1Q6P1K2 205 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 TADA2BQ86TJ2 420 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 ACTRT1Q8TDG2 376 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 ALG3Q92685 438 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 CD101Q93033 1021 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 SUSD3Q96L08 255 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 CASD1Q96PB1 797 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 KRT12Q99456 494 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 DNAJB4Q9UDY4 337 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 IP6K2Q9UHH9 426 aa11.9□□□□□ -0.51
LYRM2-201ENST00000412237 TTC3P53804 2025 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 SIGLEC16A6NMB1 481 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 HMGB1P1B2RPK0 211 aaPredicted RBP11.89□□□□□ -0.51
LYRM2-201ENST00000412237 E5RJQ4 531 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CCDC188H7C350 402 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CLDN5O00501 218 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CYP11A1P05108 521 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 GLI1P08151 1106 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 KRT3P12035 628 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CTNNA2P26232 953 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 HSPA9P38646 679 aaKnown RBP11.89□□□□□ -0.51
LYRM2-201ENST00000412237 SLC1A1P43005 524 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CARSP49589 748 aaKnown RBP11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CDR1P51861 262 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 BCAT1P54687 386 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 GSCP56915 257 aaPredicted RBP11.89□□□□□ -0.51
LYRM2-201ENST00000412237 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 B4GALNT4Q76KP1 1039 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 NECAB2Q7Z6G3 386 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 NPAS4Q8IUM7 802 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 IQCKQ8N0W5 287 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 JOSD2Q8TAC2 188 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 SLC35F5Q8WV83 523 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 MCRS1Q96EZ8 462 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 HNRNPABQ99729 332 aaKnown RBP11.89□□□□□ -0.51
LYRM2-201ENST00000412237 NCAPGQ9BPX3 1015 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 RTP3Q9BQQ7 232 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 MED10Q9BTT4 135 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 SLC4A5Q9BY07 1137 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 NRDE2Q9H7Z3 1164 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 METTL5Q9NRN9 209 aaKnown RBP11.89□□□□□ -0.51
LYRM2-201ENST00000412237 DSEQ9UL01 958 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 CDH9Q9ULB4 789 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 NFU1Q9UMS0 254 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 PCDHB8Q9UN66 801 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
LYRM2-201ENST00000412237 PRG3Q9Y2Y8 225 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms