RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 ACOT1Q86TX2 421 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 SLC9A9Q8IVB4 645 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 KIAA2013Q8IYS2 634 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 SH3RF2Q8TEC5 729 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
LINC00963-201ENST00000412141 SPATA17Q96L03 361 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 MYRFLQ96LU7 910 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 FAM83CQ9BQN1 747 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 C2orf42Q9NWW7 574 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 ZSCAN32Q9NX65 697 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 DUS2Q9NX74 493 aaKnown RBP12.35□□□□□ -0.43
LINC00963-201ENST00000412141 SMPD4Q9NXE4 827 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 TRPM5Q9NZQ8 1165 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 ZNF638Q14966 1978 aaKnown RBP12.35□□□□□ -0.43
LINC00963-201ENST00000412141 DMXL1Q9Y485 3027 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 TRIM66O15016 1216 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 AKAP3O75969 853 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 KIF20AO95235 890 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
LINC00963-201ENST00000412141 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 CCDC130P13994 396 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 IFNAR2P48551 515 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 AP3M2P53677 418 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 FAM160A1Q05DH4 1040 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 DMWDQ09019 674 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 TAF10Q12962 218 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 ADAM9Q13443 819 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 MTF1Q14872 753 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 C8orf48Q96LL4 319 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 ELOVL4Q9GZR5 314 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 LINC00597Q9H2U6 94 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 KIF9Q9HAQ2 790 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 FBRSL1Q9HCM7 1045 aaKnown RBP12.34□□□□□ -0.43
LINC00963-201ENST00000412141 FAM49BQ9NUQ9 324 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 POLR3BQ9NW08 1133 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-201ENST00000412141 HMGXB4Q9UGU5 601 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 CHORDC1Q9UHD1 332 aaPredicted RBP12.34□□□□□ -0.43
LINC00963-201ENST00000412141 ZMYM5Q9UJ78 669 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 PCDHGA2Q9Y5H1 932 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 ATG2BQ96BY7 2078 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 COL4A2P08572 1712 aa12.34□□□□□ -0.43
LINC00963-201ENST00000412141 CHURC1-FNTBB4DL54 471 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 AP1G2O75843 785 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 KRT13P13646 458 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 P4HA1P13674 534 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 PXNP49023 591 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-201ENST00000412141 FNTBP49356 437 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 CCR3P51677 355 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 NDST1P52848 882 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-201ENST00000412141 CLDN10P78369 228 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 PPP3CAQ08209 521 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 SRSF5Q13243 272 aaKnown RBP12.33□□□□□ -0.44
LINC00963-201ENST00000412141 PPP2R5DQ14738 602 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 ZACNQ401N2 412 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 ISM2Q6H9L7 571 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 PKN3Q6P5Z2 889 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
LINC00963-201ENST00000412141 SPEM1Q8N4L4 309 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 C12orf29Q8N999 325 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 SUMF1Q8NBK3 374 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 FBXO32Q969P5 355 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 CHFRQ96EP1 664 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 MSANTD3Q96H12 275 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 RNF38Q9H0F5 515 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 PRMT8Q9NR22 394 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-201ENST00000412141 GCNT4Q9P109 453 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
LINC00963-201ENST00000412141 NUP210Q8TEM1 1887 aaPredicted RBP12.33□□□□□ -0.44
LINC00963-201ENST00000412141 KIF26AQ9ULI4 1882 aaPredicted RBP12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ZNF840PA6NDX5 716 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 EGFP01133 1207 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 CD58P19256 250 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
LINC00963-201ENST00000412141 YWHAQP27348 245 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ADORA2BP29275 332 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
LINC00963-201ENST00000412141 GALK1P51570 392 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ZXDBP98169 803 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 GRSF1Q12849 480 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ZNF268Q14587 947 aaPredicted RBP12.32□□□□□ -0.44
LINC00963-201ENST00000412141 PDGFRLQ15198 375 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ZNF77Q15935 545 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 DGKKQ5KSL6 1271 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 FSTL4Q6MZW2 842 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 C1orf228Q6PIY5 440 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms