RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 UBXN11Q5T124 520 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 LMBRD2Q68DH5 695 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 GLB1LQ6UWU2 654 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CATSPERGQ6ZRH7 1159 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 RNF44Q7L0R7 432 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SNX32Q86XE0 403 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SIAH1Q8IUQ4 282 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CHCHD4Q8N4Q1 142 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 TSPYL6Q8N831 410 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 TDRD7Q8NHU6 1098 aaKnown RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 AFG1LQ8WV93 481 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 RFFLQ8WZ73 363 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 ZUFSPQ96AP4 578 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 MIEF2Q96C03 454 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 TIGD1Q96MW7 591 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 GDF15Q99988 308 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 KATNAL1Q9BW62 490 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 EIF2AQ9BY44 585 aaKnown RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CPEB1Q9BZB8 566 aaKnown RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SIK2Q9H0K1 926 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 CCDC68Q9H2F9 335 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 ADAM7Q9H2U9 754 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 ZCCHC4Q9H5U6 513 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 RETREG1Q9H6L5 497 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 MLXIPQ9HAP2 919 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SAYSD1Q9NPB0 183 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 NFKBIL1Q9UBC1 381 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 ORC3Q9UBD5 711 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-204ENST00000412061 SLC45A2Q9UMX9 530 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 PLEKHM1Q9Y4G2 1056 aa5.09□□□□□ -1.59
BRCA1-204ENST00000412061 TRIM43BA6NCK2 446 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 PABPN1LA6NDY0 278 aaKnown RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 OTOL1A6NHN0 477 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 DRGXA6NNA5 263 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 P4HA2O15460 535 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 FOXS1O43638 330 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 FAM155BO75949 473 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 UNC5CO95185 931 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 DNTTP04053 509 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 ITGA5P08648 1049 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 TGFB3P10600 412 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 JUPP14923 745 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 HK1P19367 917 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 ZNF135P52742 658 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 POU6F2P78424 691 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 CSRP2Q16527 193 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 ARHGAP15Q53QZ3 475 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 KLHL17Q6TDP4 642 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 UNC13DQ70J99 1090 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 MED25Q71SY5 747 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 USP37Q86T82 979 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 GSPT2Q8IYD1 628 aaKnown RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 GLIS1Q8NBF1 620 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 TMIEQ8NEW7 156 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 MAML1Q92585 1016 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 TRIM43Q96BQ3 446 aaPredicted RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 C7orf26Q96N11 449 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 ZNF518BQ9C0D4 1074 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 REXO4Q9GZR2 422 aaKnown RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 PAIP1Q9H074 479 aaKnown RBP5.08□□□□□ -1.6
BRCA1-204ENST00000412061 XYLT2Q9H1B5 865 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 SMURF2Q9HAU4 748 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 TBC1D23Q9NUY8 699 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 GIMAP2Q9UG22 337 aa5.08□□□□□ -1.6
BRCA1-204ENST00000412061 CAPN14A8MX76 684 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 M0QYG6 137 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 GPR42O15529 346 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 DNAJB5O75953 348 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 GRPP07492 148 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 SLC3A2P08195 630 aaKnown RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 HSP90AB1P08238 724 aaKnown RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 CKBP12277 381 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 UBA7P41226 1012 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 CHN2P52757 468 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 UBE3AQ05086 875 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 CUL4BQ13620 913 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 SLC12A1Q13621 1099 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 EFR3AQ14156 821 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 CRB2Q5IJ48 1285 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 SGMS1Q86VZ5 419 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 CCDC117Q8IWD4 279 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 NRSN1Q8IZ57 195 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 CCDC150Q8NCX0 1101 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 SLC17A8Q8NDX2 589 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 ZMIZ2Q8NF64 920 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 ST8SIA4Q92187 359 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 EID2BQ96D98 161 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 PHACTR3Q96KR7 559 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 COG8Q96MW5 612 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 KLHL32Q96NJ5 620 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 RSF1Q96T23 1441 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 PRPF18Q99633 342 aaKnown RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 AGXT2Q9BYV1 514 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 IMPG2Q9BZV3 1241 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 TINAGL1Q9GZM7 467 aaPredicted RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 GHITMQ9H3K2 345 aa5.07□□□□□ -1.6
BRCA1-204ENST00000412061 ELAC1Q9H777 363 aaKnown RBP5.07□□□□□ -1.6
BRCA1-204ENST00000412061 SEPSECSQ9HD40 501 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms