RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 E4F1Q66K89 784 aaPredicted RBP17.59■□□□□ 0.41
IMP4-202ENST00000409649 WDR59Q6PJI9 974 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 CCDC186Q7Z3E2 898 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 ZNF571Q7Z3V5 609 aaPredicted RBP17.59■□□□□ 0.41
IMP4-202ENST00000409649 CMASQ8NFW8 434 aaPredicted RBP17.59■□□□□ 0.41
IMP4-202ENST00000409649 UBA3Q8TBC4 463 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
IMP4-202ENST00000409649 SLC20A1Q8WUM9 679 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 SLC35F5Q8WV83 523 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 KCTD13Q8WZ19 329 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 SECISBP2LQ93073 1101 aaKnown RBP17.59■□□□□ 0.41
IMP4-202ENST00000409649 SYT11Q9BT88 431 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.59■□□□□ 0.41
IMP4-202ENST00000409649 RHOBTB2Q9BYZ6 727 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 FBXO44Q9H4M3 255 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 IGFLR1Q9H665 355 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 LRRC4Q9HBW1 653 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 ARHGAP20Q9P2F6 1191 aa17.59■□□□□ 0.41
IMP4-202ENST00000409649 AKR1B10O60218 316 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 IPO7O95373 1038 aaKnown RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 CYP1A1P04798 512 aaPredicted RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 SPATA31D3P0C874 917 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 CHRNB2P17787 502 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 CYLC1P35663 651 aaPredicted RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 NSFP46459 744 aaKnown RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 TWF1Q12792 350 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 ADAM15Q13444 863 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 DENND1BQ6P3S1 775 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 SPATA31D4Q6ZUB0 917 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 DENND5BQ6ZUT9 1274 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 PIGZQ86VD9 579 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 NUP93Q8N1F7 819 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 LEMD2Q8NC56 503 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 ZNF512Q96ME7 567 aaPredicted RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 SMOQ99835 787 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 BAG1Q99933 345 aaPredicted RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 LUC7LQ9NQ29 371 aaKnown RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 MTMR10Q9NXD2 777 aa17.58■□□□□ 0.4
IMP4-202ENST00000409649 UXTQ9UBK9 157 aaPredicted RBP17.58■□□□□ 0.4
IMP4-202ENST00000409649 SART1O43290 800 aaKnown RBP17.57■□□□□ 0.4
IMP4-202ENST00000409649 PAPLNO95428 1278 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 FGF19O95750 216 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 CALCAP01258 141 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 NOMO3P69849 1222 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 COL19A1Q14993 1142 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 DDR2Q16832 855 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 CLEC16AQ2KHT3 1053 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 LLGL2Q6P1M3 1020 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 ZDHHC17Q8IUH5 632 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 PSMG2Q969U7 264 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 PABPC5Q96DU9 382 aaKnown RBP17.57■□□□□ 0.4
IMP4-202ENST00000409649 KCNK16Q96T55 309 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 CRISPLD1Q9H336 500 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 SYNCQ9H7C4 482 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 NHEJ1Q9H9Q4 299 aaPredicted RBP17.57■□□□□ 0.4
IMP4-202ENST00000409649 ADAMTS1Q9UHI8 967 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 STRIP2Q9ULQ0 834 aa17.57■□□□□ 0.4
IMP4-202ENST00000409649 FBXO21O94952 628 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 UNGP13051 313 aaPredicted RBP17.56■□□□□ 0.4
IMP4-202ENST00000409649 ATF6P18850 670 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 EIF4A3P38919 411 aaKnown RBP17.56■□□□□ 0.4
IMP4-202ENST00000409649 PPP3CCP48454 512 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 RPL34P49207 117 aaKnown RBP17.56■□□□□ 0.4
IMP4-202ENST00000409649 CENPCQ03188 943 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 GOLGA8FQ08AF8 430 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 GOLGA8DPQ0D2H9 430 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 PDCLQ13371 301 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 SLC18A3Q16572 532 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 CTC1Q2NKJ3 1217 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 C10orf76Q5T2E6 689 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 Q7L0L9 218 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 TMEM110Q86TL2 294 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 ERICH1Q86X53 443 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 PASD1Q8IV76 773 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 SIX6OS1Q8N1H7 587 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 SCML4Q8N228 414 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 TTC9BQ8N6N2 239 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 C1orf131Q8NDD1 294 aaKnown RBP17.56■□□□□ 0.4
IMP4-202ENST00000409649 ZMIZ2Q8NF64 920 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 SLC30A5Q8TAD4 765 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 MYLIPQ8WY64 445 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 TRIM11Q96F44 468 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 TRMT2BQ96GJ1 504 aaKnown RBP17.56■□□□□ 0.4
IMP4-202ENST00000409649 VCPIP1Q96JH7 1222 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 PPP1R13BQ96KQ4 1090 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 GUCD1Q96NT3 240 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 TRIM62Q9BVG3 475 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 SLC4A5Q9BY07 1137 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 PRKD2Q9BZL6 878 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 CNGB3Q9NQW8 809 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 ST7Q9NRC1 585 aa17.56■□□□□ 0.4
IMP4-202ENST00000409649 RTN2O75298 545 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 BEST1O76090 585 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 CALB1P05937 261 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 YWHAQP27348 245 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 SLC5A3P53794 718 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 ITIH3Q06033 890 aa17.55■□□□□ 0.4
IMP4-202ENST00000409649 PABPC1LQ4VXU2 614 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms