RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ABLIM3O94929 683 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 OR4Q2P0C623 313 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 ANXA13P27216 316 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 CFAP221Q4G0U5 840 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 WDR59Q6PJI9 974 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 LCLAT1Q6UWP7 414 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 RTL10Q7L3V2 364 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 SLC2A14Q8TDB8 520 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 TFAP2BQ92481 460 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 MYLPFQ96A32 169 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 SMARCD1Q96GM5 515 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 RPGRIP1Q96KN7 1286 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 AGPAT1Q99943 283 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 POMKQ9H5K3 350 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 ACP6Q9NPH0 428 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 HSFX1Q9UBD0 423 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 AFF4Q9UHB7 1163 aaKnown RBP17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 TSPAN16Q9UKR8 245 aa17.48■□□□□ 0.39
TSPAN4-208ENST00000409531 SSU72P8A0A1W2PR75 194 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 FAM200BP0CF97 657 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 SKILP12757 684 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 CCDC130P13994 396 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ATF2P15336 505 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 TNFAIP3P21580 790 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ADORA2BP29275 332 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 BCAT1P54687 386 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 LIN9Q5TKA1 542 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 HGSNATQ68CP4 663 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 VSTM1Q6UX27 236 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 TRIM72Q6ZMU5 477 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 RNF19BQ6ZMZ0 732 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 FAM35AQ86V20 835 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 GPIHBP1Q8IV16 184 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 FUKQ8N0W3 1084 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ANKRD52Q8NB46 1076 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 CCDC112Q8NEF3 446 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 FEZF2Q8TBJ5 459 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 DDX1Q92499 740 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PPP1R9BQ96SB3 815 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 B3GNT5Q9BYG0 378 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 DEF6Q9H4E7 631 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 TMLHEQ9NVH6 421 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ABI2Q9NYB9 513 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PLXNA3P51805 1871 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 MTMR11A4FU01 709 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 M0QYV0 167 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 LSM8O95777 96 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 CALCAP01258 141 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 C8AP07357 584 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 HNRNPA1P09651 372 aaKnown RBP eCLIP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 FECHP22830 423 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 HOXA9P31269 272 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ELF1P32519 619 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 MAGEA11P43364 429 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 BST2Q10589 180 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 GOLGA7BQ2TAP0 167 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PPM1LQ5SGD2 360 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PPP1R2P3Q6NXS1 205 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 CCDC149Q6ZUS6 474 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 SLC20A1Q8WUM9 679 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 SMG7Q92540 1137 aaKnown RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ZNF707Q96C28 371 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 CCDC42Q96M95 316 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PGLYRP2Q96PD5 576 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 LPIN3Q9BQK8 851 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ZSWIM1Q9BR11 485 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ZNF518BQ9C0D4 1074 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 LHX5Q9H2C1 402 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 PIDD1Q9HB75 910 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 ARHGAP20Q9P2F6 1191 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 NR2E1Q9Y466 385 aa17.47■□□□□ 0.39
TSPAN4-208ENST00000409531 AP1G2O75843 785 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 MICAL2O94851 1124 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 MMEP08473 750 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 SETSIPP0DME0 302 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 NPR3P17342 541 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 BDNFP23560 247 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 HOXD11P31277 338 aaPredicted RBP17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 FMO1Q01740 532 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 ADCY1Q08828 1119 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 CCDC142Q17RM4 750 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 PAQR9Q6ZVX9 377 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 ZNF571Q7Z3V5 609 aaPredicted RBP17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 CCDC170Q8IYT3 715 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 TMEM35BQ8NCS4 154 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 SYT11Q9BT88 431 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 DUSP16Q9BY84 665 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 WDR6Q9NNW5 1121 aaKnown RBP17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 KRT82Q9NSB4 513 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 SEPT11Q9NVA2 429 aaKnown RBP17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 USTQ9Y2C2 406 aa17.46■□□□□ 0.38
TSPAN4-208ENST00000409531 CLDN5O00501 218 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 TRIM66O15016 1216 aa17.45■□□□□ 0.38
TSPAN4-208ENST00000409531 EIF4A3P38919 411 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms