RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 EXOC4Q96A65 974 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 RNF25Q96BH1 459 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CAPNS2Q96L46 248 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 HSFY1Q96LI6 401 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 PPP1R10Q96QC0 940 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 SH3GL2Q99962 352 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TRIM51Q9BSJ1 452 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CNPY3Q9BT09 278 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TRAIPQ9BWF2 469 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 FRMD8P1Q9BZ68 369 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TRIM31Q9BZY9 425 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 CXCL16Q9H2A7 254 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 ZDHHC18Q9NUE0 388 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 FAM105AQ9NUU6 356 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 PSD3Q9NYI0 1048 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 WHRNQ9P202 907 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 VPS18Q9P253 973 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 DRG1Q9Y295 367 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 SNX24Q9Y343 169 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 KAT6AQ92794 2004 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 TRPM7Q96QT4 1865 aa6.59□□□□□ -1.35
GTF3C3-202ENST00000409364 LRRD1A4D1F6 860 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 GOLGA6L10A6NI86 522 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 A6NNZ2 444 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 NDC80O14777 642 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 SPTLC1O15269 473 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 AOC2O75106 756 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 CAND2O75155 1236 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PPFIA2O75334 1257 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 LRCH4O75427 683 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 KRT1P04264 644 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PFKMP08237 780 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PDGFRBP09619 1106 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PDGFRAP16234 1089 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 GPD1P21695 349 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 WARSP23381 471 aaKnown RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 CCND3P30281 292 aaPredicted RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 GJC1P36383 396 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 HSD17B3P37058 310 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 THPOP40225 353 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 CDKN2BP42772 138 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 LHX1P48742 406 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 BCAT1P54687 386 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 EIF3BP55884 814 aaKnown RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PRR20EP86478 221 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PRR20CP86479 221 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PRR20DP86480 221 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PRR20BP86481 221 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PRR20AP86496 221 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 SLC6A3Q01959 620 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 MGAT3Q09327 533 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 TRIM32Q13049 653 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 SNX1Q13596 522 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 ITGA7Q13683 1181 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 SLMAPQ14BN4 828 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 TUBB8Q3ZCM7 444 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 BOLA3Q53S33 107 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 FAM26DQ5JW98 314 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 MAP3K21Q5TCX8 1036 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 DAB2IPQ5VWQ8 1189 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PMF1Q6P1K2 205 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 MFSD7Q6UXD7 560 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 SPOCD1Q6ZMY3 1216 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 ZNF365Q70YC5 407 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 ARCQ7LC44 396 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 TTC30AQ86WT1 665 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 MAP7D3Q8IWC1 876 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 CCDC89Q8N998 374 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 TTC13Q8NBP0 860 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 KCTD6Q8NC69 237 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 ARRDC4Q8NCT1 418 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 CMASQ8NFW8 434 aaPredicted RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 JOSD2Q8TAC2 188 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 ART4Q93070 314 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PGBD4Q96DM1 585 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 ZIM3Q96PE6 472 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 SLITRK1Q96PX8 696 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 TSEN34Q9BSV6 310 aaKnown RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 UBN1Q9NPG3 1134 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 METTL5Q9NRN9 209 aaKnown RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 CHST7Q9NS84 486 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 TJP2Q9UDY2 1190 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 DDX20Q9UHI6 824 aaKnown RBP6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PADI3Q9ULW8 664 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 NOD1Q9Y239 953 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 FAN1Q9Y2M0 1017 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 PTPN22Q9Y2R2 807 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 DOCK3Q8IZD9 2030 aa6.59□□□□□ -1.36
GTF3C3-202ENST00000409364 GRIN2DO15399 1336 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 hCG_1818297A0A087WSY0 165 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 A0A0U1RQF3 1178 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 MOXD2PA6NHM9 499 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 C2CD4BA6NLJ0 364 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 E5RJQ4 531 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 PI4K2BG5E9Z4 385 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 CYB561D2O14569 222 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 PTGESO14684 152 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 TRPA1O75762 1119 aa6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 TRUB2O95900 331 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-202ENST00000409364 CTSHP09668 335 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms