RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RABEPKQ7Z6M1 372 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 NAXDQ8IW45 347 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 PGBD3Q8N328 593 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 KCNN1Q92952 543 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 CRELD1Q96HD1 420 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 MMTAG2Q9BU76 263 aaKnown RBP13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 KCNG1Q9UIX4 513 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 DERAQ9Y315 318 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 PCDHB9Q9Y5E1 797 aa13.82□□□□□ -0.2
CHRNA1-203ENST00000409219 KALRNO60229 2985 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 A0A0B4J269 797 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 KAT7O95251 611 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 PRB1P04280 392 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 EIF2DP41214 584 aaKnown RBP13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 ST3GAL1Q11201 340 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 SLC14A1Q13336 389 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 ANKRD1Q15327 319 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 KRT79Q5XKE5 535 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 SLCO6A1Q86UG4 719 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 SPATA18Q8TC71 538 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 PNKPQ96T60 521 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 PKMYT1Q99640 499 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 MSTO1Q9BUK6 570 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 DKK4Q9UBT3 224 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 C2CD2Q9Y426 696 aa13.81□□□□□ -0.2
CHRNA1-203ENST00000409219 MYMKA6NI61 221 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 KPNA7A9QM74 516 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 LEFTY2O00292 366 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 APODP05090 189 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SYPP08247 313 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 GABRG2P18507 467 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 HDCP19113 662 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 KDSRQ06136 332 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 RESTQ13127 1097 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 DHCR24Q15392 516 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SV2CQ496J9 727 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SLC36A4Q6YBV0 504 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SYT2Q8N9I0 419 aaPredicted RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 FOXP1Q9H334 677 aaPredicted RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 ASB7Q9H672 318 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 LARSQ9P2J5 1176 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SHROOM3Q8TF72 1996 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 IGHV1OR15-9A0A0B4J2B8 117 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 NPHP3-ACAD11A0A0J9YXS1 232 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 H0YCG3 227 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SCAMP3O14828 347 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 C1QL1O75973 258 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 ACAT1P24752 427 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 ACOT2P49753 483 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 SLC12A3P55017 1021 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 ATP2C1P98194 919 aaPredicted RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 IL17AQ16552 155 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 INTS6LQ5JSJ4 861 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 ADGRG2Q8IZP9 1017 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 PHTF2Q8N3S3 785 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 PDCL2Q8N4E4 241 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 HSPA12BQ96MM6 686 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 L1RE1Q9UN81 338 aa13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 APOBEC2Q9Y235 224 aaKnown RBP13.8□□□□□ -0.2
CHRNA1-203ENST00000409219 A0A0A0MRY4 1105 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 K7ENM7 598 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 CBFA2T3O75081 653 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 ANP32AP39687 249 aaKnown RBP13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 CFAP221Q4G0U5 840 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 GLRX5Q86SX6 157 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 ARHGEF4Q9NR80 690 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 DDX43Q9NXZ2 648 aaKnown RBP13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
CHRNA1-203ENST00000409219 GOLGA4Q13439 2230 aaKnown RBP13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 TISP43B9A030 160 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 HCRTO43612 131 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 GRIA2P42262 883 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 PDE6CP51160 858 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 C19orf57Q0VDD7 668 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 GRIK2Q13002 908 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 ZRSR1Q15695 479 aaKnown RBP13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 PLEKHG6Q3KR16 790 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 HYIQ5T013 277 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 RHBDF2Q6PJF5 856 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 TMPRSS7Q7RTY8 843 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 SCN4BQ8IWT1 228 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 TRIML1Q8N9V2 468 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 C8orf76Q96K31 380 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 ZNF560Q96MR9 790 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 CD93Q9NPY3 652 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 KCND2Q9NZV8 630 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 PCOLCE2Q9UKZ9 415 aa13.78□□□□□ -0.2
CHRNA1-203ENST00000409219 PCDHB6Q9Y5E3 794 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms