RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	EIF2A	Q9BY44	585 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	MTFR1L	Q9H019	292 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TMBIM4	Q9HC24	238 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	STX18	Q9P2W9	335 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CXCL8	P10145	99 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ALDH1A3	P47895	512 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CCNG2	Q16589	344 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SPDYA	Q5MJ70	313 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FBXW10	Q5XX13	1052 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	IL17RA	Q96F46	866 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RPRD1A	Q96P16	312 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FAM111A	Q96PZ2	611 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	KCNQ5	Q9NR82	932 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	PMPCB	O75439	489 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FBXO25	Q8TCJ0	367 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RHOBTB1	O94844	696 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	MAP3K6	O95382	1288 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	PCYOX1L	Q8NBM8	494 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	MTMR8	Q96EF0	704 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	GPR63	Q9BZJ6	419 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SLC4A7	Q9Y6M7	1214 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ARHGAP10	A1A4S6	786 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	AIM2	O14862	343 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CYTH3	O43739	400 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	OAZ1	P54368	228 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	POTEA	Q6S8J7	498 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SLFN11	Q7Z7L1	901 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RFWD2	Q8NHY2	731 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CINP	Q9BW66	212 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CHCHD3	Q9NX63	227 aa	Known RBP	13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RPS6KL1	Q9Y6S9	549 aa		13.81	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TGM2	P21980	687 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	THTPA	Q9BU02	230 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	GLRA3	O75311	464 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FBXO21	O94952	628 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TGFB3	P10600	412 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	YY1	P25490	414 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FKBP1A	P62942	108 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ARHGEF19	Q8IW93	802 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	KIF2B	Q8N4N8	673 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	AP4E1	Q9UPM8	1137 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ZRANB3	Q5FWF4	1079 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SETD3	Q86TU7	594 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	NUP93	Q8N1F7	819 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	EMC1	Q8N766	993 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	AKT1S1	Q96B36	256 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CFAP99	D6REC4	459 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CHRM3	P20309	590 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	C1QBP	Q07021	282 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TBX2	Q13207	712 aa	Predicted RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	MCOLN2	Q8IZK6	566 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	EPHX2	P34913	555 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SLC11A2	P49281	568 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	BTNL9	Q6UXG8	535 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	DNAAF5	Q86Y56	855 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	COG4	Q9H9E3	785 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	NSL1	Q96IY1	281 aa		13.8	□□□□□ -0.2
CACNA1C-222	ENST00000406454	NKRF	O15226	690 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	APOA4	P06727	396 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SH3RF1	Q7Z6J0	888 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RXFP2	Q8WXD0	754 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	PPP2R3C	Q969Q6	453 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	USP18	Q9UMW8	372 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	STX7	O15400	261 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	HOXA10	P31260	410 aa	Predicted RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	MTFR1	Q15390	333 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	LY6K	Q17RY6	165 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	PRPF39	Q86UA1	669 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	C3orf20	Q8ND61	904 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SGF29	Q96ES7	293 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	MTMR9	Q96QG7	549 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RIC8B	Q9NVN3	520 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	PHTF1	Q9UMS5	762 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	AAR2	Q9Y312	384 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	SDR42E2	A6NKP2	422 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454		H3BRB1	525 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	VCP	P55072	806 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TUT1	Q9H6E5	874 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	GIMAP4	Q9NUV9	329 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ITGA11	Q9UKX5	1188 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	CYP3A4	P08684	503 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	INSRR	P14616	1297 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	BST2	Q10589	180 aa	Known RBP	13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FAM83E	Q2M2I3	478 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	FAM131B	Q86XD5	332 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TBC1D19	Q8N5T2	526 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	OR9Q1	Q8NGQ5	310 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	OPTN	Q96CV9	577 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	TMEM121	Q9BTD3	319 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	ARHGAP23	Q9P227	1491 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	WNT10B	O00744	389 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	RALB	P11234	206 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	GCNT1	Q02742	428 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	LOC100653049	A0A140TA62	436 aa		13.79	□□□□□ -0.2
CACNA1C-222	ENST00000406454	EML1	O00423	815 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms