RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ERP27Q96DN0 273 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 TMEM120BA0PK00 339 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 C17orf102A2RUQ5 167 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 MGAT4DA6NG13 374 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 CETPP11597 493 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 RFX3P48380 749 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 CTCFP49711 727 aaPredicted RBP12.48□□□□□ -0.41
SMCR8-201ENST00000406438 TRIP10Q15642 601 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 OLFML2BQ68BL8 750 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 EXD1Q8NHP7 514 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 NUDT12Q9BQG2 462 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 SH2D3AQ9BRG2 576 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 ADAM30Q9UKF2 790 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 PADI4Q9UM07 663 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 AP4S1Q9Y587 144 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 SERPINB8P50452 374 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF544Q6NX49 715 aa12.48□□□□□ -0.41
SMCR8-201ENST00000406438 C1DQ13901 141 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 GSTA3Q16772 222 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 EDRF1Q3B7T1 1238 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 C1orf131Q8NDD1 294 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 E2F7Q96AV8 911 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 FRMD8P1Q9BZ68 369 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 TNS3Q68CZ2 1445 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 HLA-DRAP01903 254 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 ITGB3P05106 788 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CYP19A1P11511 503 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CYP2C9P11712 490 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 SERAC1Q96JX3 654 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 NFKBIZQ9BYH8 718 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CTNNAL1Q9UBT7 734 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 STX7O15400 261 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CST8O60676 142 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 AVPR1AP37288 418 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 RPS7P62081 194 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 PLCL1Q15111 1095 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 KYNUQ16719 465 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF669Q96BR6 464 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 FAM84BQ96KN1 310 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CCDC3Q9BQI4 270 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 TRIM51Q9BSJ1 452 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 OSBPL6Q9BZF3 934 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 NIF3L1Q9GZT8 377 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 TSC22D4Q9Y3Q8 395 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 MORC2Q9Y6X9 1032 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 TAF6P49848 677 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 PGS1Q32NB8 556 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 C3orf20Q8ND61 904 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 ABCC3O15438 1527 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 A0A1B0GTH6 734 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 GPR182O15218 404 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 SYNCRIPO60506 623 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 IGKV5-2P06315 115 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 EPHB2P29323 1055 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 RIN2Q8WYP3 895 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 DSEQ9UL01 958 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 DLGAP3O95886 979 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 GTF2E2P29084 291 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 ITGA8P53708 1063 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 PDIA6Q15084 440 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 XRRA1Q6P2D8 792 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 FBXO2Q9UK22 296 aaPredicted RBP12.47□□□□□ -0.41
SMCR8-201ENST00000406438 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 EGFRP00533 1210 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 PDHBP11177 359 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 LAYNQ6UX15 382 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 SH3GL2Q99962 352 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CLPBQ9H078 707 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 SYBUQ9NX95 663 aa12.47□□□□□ -0.41
SMCR8-201ENST00000406438 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 PCNAP12004 261 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 THPOP40225 353 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 HERC6Q8IVU3 1022 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 C19orf18Q8NEA5 215 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 WDR24Q96S15 920 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 MIEF1Q9NQG6 463 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 A0A1W2PQJ5 194 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 PDZK1P1A8MUH7 402 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 B2RBV5 119 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 TBC1D12O60347 775 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 ZNF614Q8N883 585 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 SLC20A1Q8WUM9 679 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 RUVBL2Q9Y230 463 aaKnown RBP12.46□□□□□ -0.41
SMCR8-201ENST00000406438 MYO3AQ8NEV4 1616 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 P4HA2O15460 535 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 COMTP21964 271 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 YME1L1Q96TA2 773 aa12.46□□□□□ -0.41
SMCR8-201ENST00000406438 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms