RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 TRUB2O95900 331 aaKnown RBP13.64□□□□□ -0.23
PRAME-203ENST00000402697 IFNB1P01574 187 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 GPD2P43304 727 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
PRAME-203ENST00000402697 CDC42EP1Q00587 391 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 SPRED3Q2MJR0 410 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 BOLA3Q53S33 107 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 TXNRD3NBQ6F5E7 133 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 LCLAT1Q6UWP7 414 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 GLIS1Q8NBF1 620 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 FBF1Q8TES7 1133 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 TEKT4Q8WW24 435 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 CPXM1Q96SM3 734 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 TBCBQ99426 244 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 FAM118BQ9BPY3 351 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
PRAME-203ENST00000402697 DNAI2Q9GZS0 605 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
PRAME-203ENST00000402697 GPR25O00155 361 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 DPYSL4O14531 572 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 FAM155BO75949 473 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 MICAL2O94851 1124 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ZSCAN5DPP0CG00 497 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 RNASELQ05823 741 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 SETDB1Q15047 1291 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ZDHHC17Q8IUH5 632 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ARFGAP1Q8N6T3 406 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 JOSD2Q8TAC2 188 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 CPT1BQ92523 772 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ADPGKQ9BRR6 497 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 USH1CQ9Y6N9 552 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 RBM47A0AV96 593 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 TYROBPO43914 113 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 DCTN3O75935 186 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 UBOX5O94941 541 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 GH1P01241 217 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ERBB2P04626 1255 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 NFICP08651 508 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 GSTA2P09210 222 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 GPD1P21695 349 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 IL1R2P27930 398 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 MIPP30301 263 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 RPL22P35268 128 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 WDR4P57081 412 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 EIF3EP60228 445 aaKnown RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 PPARDQ03181 441 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 TMEM132DQ14C87 1099 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 NOMO1Q15155 1222 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 PCBP1Q15365 356 aaKnown RBP eCLIP13.63□□□□□ -0.231e-11■■□□□ 11.5
PRAME-203ENST00000402697 AMHR2Q16671 573 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 JADE1Q6IE81 842 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 RFX6Q8HWS3 928 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
PRAME-203ENST00000402697 GDAP1Q8TB36 358 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 STK32AQ8WU08 396 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 HPDLQ96IR7 371 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ZWILCHQ9H900 591 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 PRDM16Q9HAZ2 1276 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 TXLNGQ9NUQ3 528 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 ABCF3Q9NUQ8 709 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 CYTH4Q9UIA0 394 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 RABGEF1Q9UJ41 708 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
PRAME-203ENST00000402697 POC1B-GALNT4F8VUJ3 575 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 M0QYV0 167 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 CHADO15335 359 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 B4GALT5O43286 388 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 HNRNPCL1O60812 293 aaKnown RBP13.62□□□□□ -0.23
PRAME-203ENST00000402697 ITGB3P05106 788 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 CCNB1P14635 433 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 NQO1P15559 274 aaKnown RBP13.62□□□□□ -0.23
PRAME-203ENST00000402697 TGM2P21980 687 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 SCNN1AP37088 669 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 FKBP1BP68106 108 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 WLSQ5T9L3 541 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
PRAME-203ENST00000402697 ZNF410Q86VK4 478 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 PPTC7Q8NI37 304 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 LRRC8CQ8TDW0 803 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 BRI3BPQ8WY22 251 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 COPS5Q92905 334 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 RTP4Q96DX8 246 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 TSPAN18Q96SJ8 248 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 CYTH2Q99418 400 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 NT5C1AQ9BXI3 368 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 ELOVL4Q9GZR5 314 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 PDZD7Q9H5P4 517 aa13.62□□□□□ -0.23
PRAME-203ENST00000402697 PNPLA8Q9NP80 782 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms