RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 UBA3Q8TBC4 463 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 SH3TC2Q8TF17 1288 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 MOV10L1Q9BXT6 1211 aaKnown RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 MTO1Q9Y2Z2 717 aaKnown RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 COQ4Q9Y3A0 265 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ATRNL1Q5VV63 1379 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 TMEM191CA6NGB0 347 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 PEX10O60683 326 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 RNF8O76064 485 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ICAM1P05362 532 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ABHD2P08910 425 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 TMEM191BP0C7N4 346 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 IL1R2P27930 398 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 BST1Q10588 318 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 GRAMD1BQ3KR37 738 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ZACNQ401N2 412 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 SH3PXD2AQ5TCZ1 1133 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 LPCAT4Q643R3 524 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 CCDC60Q8IWA6 550 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 SCUBE1Q8IWY4 988 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 KBTBD2Q8IY47 623 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 NDUFAF2Q8N183 169 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ATP6V0A1Q93050 837 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 NGRNQ9NPE2 291 aaKnown RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 CISHQ9NSE2 258 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 PRR5-ARHGAP8B1AHC4 643 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 LYPLA1O75608 230 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 SORBS2O94875 1100 aaKnown RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 ARHGAP8P85298 464 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ZNF252P-AS1Q0IIN9 211 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 KRT81Q14533 505 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 VPS72Q15906 364 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 TCHHL1Q5QJ38 904 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 PLEKHA7Q6IQ23 1121 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 TREML1Q86YW5 311 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 C12orf56Q8IXR9 622 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 E2F7Q96AV8 911 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 WNK4Q96J92 1243 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ZNF184Q99676 751 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 PDCD2LQ9BRP1 358 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 PCDH9Q9HC56 1237 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ZNF70Q9UC06 446 aaPredicted RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 ZC3H7BQ9UGR2 993 aaKnown RBP9.58□□□□□ -0.88
HPS4-203ENST00000402105 RIPK3Q9Y572 518 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 ARFGEF1Q9Y6D6 1849 aa9.58□□□□□ -0.88
HPS4-203ENST00000402105 MAGEB2O15479 319 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 NR3C2P08235 984 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 MUTP22033 750 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 MSX2P35548 267 aaPredicted RBP9.57□□□□□ -0.88
HPS4-203ENST00000402105 GMPRP36959 345 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 CDKN2BP42772 138 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 JAK3P52333 1124 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 CRADDP78560 199 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 KRT76Q01546 638 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 TCEAL1Q15170 157 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 RAB6CQ53S08 254 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 DENND1BQ6P3S1 775 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 CRLF3Q8IUI8 442 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 LARGE2Q8N3Y3 721 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 KCTD17Q8N5Z5 321 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 BANPQ8N9N5 519 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 TFAP2BQ92481 460 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 NMD3Q96D46 503 aaKnown RBP9.57□□□□□ -0.88
HPS4-203ENST00000402105 EBF4Q9BQW3 602 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 RAB6CQ9H0N0 254 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 IL1RAPL1Q9NZN1 696 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SLC17A6Q9P2U8 582 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 POLIQ9UNA4 740 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SHOC2Q9UQ13 582 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SPATA31A6Q5VVP1 1343 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 KIF3CO14782 793 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 C4BPAP04003 597 aaKnown RBP9.57□□□□□ -0.88
HPS4-203ENST00000402105 CALB1P05937 261 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SAT1P21673 171 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 RGS7P49802 495 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 IRGCQ6NXR0 463 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 TUBGCP5Q96RT8 1024 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SAR1AQ9NR31 198 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 RNF146Q9NTX7 359 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.57□□□□□ -0.88
HPS4-203ENST00000402105 EURLQ9NYK6 297 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 ANGPTL2Q9UKU9 493 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SYNJ2BP-COX16A0A087WUM0 186 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 DCAF8L1A6NGE4 600 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 CXorf49A8MYA2 514 aaPredicted RBP9.57□□□□□ -0.88
HPS4-203ENST00000402105 KCNA4P22459 653 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 MMP8P22894 467 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 GSTT1P30711 240 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 ASPHQ12797 758 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 DPYSL3Q14195 570 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 EFHC2Q5JST6 749 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 FAM102AQ5T9C2 384 aaPredicted RBP9.57□□□□□ -0.88
HPS4-203ENST00000402105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.57□□□□□ -0.88
HPS4-203ENST00000402105 ZNF677Q86XU0 584 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 DCAKDQ8WVC6 231 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 CLEC4DQ8WXI8 215 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 SLC7A3Q8WY07 619 aa9.57□□□□□ -0.88
HPS4-203ENST00000402105 ATG4CQ96DT6 458 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms