RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 MCF2LO15068 1137 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ATP6V1G2O95670 118 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PAX7P23759 505 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 KDELR1P24390 212 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 YARSP54577 528 aaKnown RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 GPX6P59796 221 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PTPN11Q06124 597 aaPredicted RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 MXD4Q14582 209 aaPredicted RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ZPBP2Q6X784 338 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PPP1R21Q6ZMI0 780 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 AFG1LQ8WV93 481 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 RXFP2Q8WXD0 754 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 CPT1BQ92523 772 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 FAF2Q96CS3 445 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 VCPIP1Q96JH7 1222 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 C12orf42Q96LP6 360 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 SLC13A1Q9BZW2 595 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 UBN1Q9NPG3 1134 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 KLK14Q9P0G3 267 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ZBTB42B2RXF5 422 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PPEF2O14830 753 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 KCNN4O15554 427 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 APRTP07741 180 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ELK3P41970 407 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 MSH2P43246 934 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 SPARCL1Q14515 664 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ITIH4Q14624 930 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 MDH1BQ5I0G3 518 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 RNASEH2BQ5TBB1 312 aaKnown RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PPM1NQ8N819 430 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 MAML1Q92585 1016 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 NDRG1Q92597 394 aaKnown RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PAFAH2Q99487 392 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 MYLK2Q9H1R3 596 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ZNF646O15015 1829 aaPredicted RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 FAM189A1O60320 539 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 F7P08709 466 aaPredicted RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 KITP10721 976 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ZNF132P52740 706 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 RABGGTBP53611 331 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 COPS2P61201 443 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 BMPR2Q13873 1038 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 CELF3Q5SZQ8 465 aaKnown RBP11.61□□□□□ -0.55
SCFD2-202ENST00000401642 RIOX2Q8IUF8 465 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 SLC4A11Q8NBS3 891 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 EVPLQ92817 2033 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 PEBP4Q96S96 227 aa11.61□□□□□ -0.55
SCFD2-202ENST00000401642 ACKR2O00590 384 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 FGFR1P11362 822 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 TFE3P19532 575 aaPredicted RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 ADORA2BP29275 332 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 ARL4CP56559 192 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 OASLQ15646 514 aaKnown RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 XYLT1Q86Y38 959 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 PDIK1LQ8N165 341 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 CCDC110Q8TBZ0 833 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 TCP10LQ8TDR4 215 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 P3H4Q92791 437 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 MAGEB18Q96M61 343 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 VPS33BQ9H267 617 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 MARCOQ9UEW3 520 aaPredicted RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 POLR2AP24928 1970 aaKnown RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 CLUHO75153 1309 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 SRRM3A6NNA2 597 aaPredicted RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 PRPSAP2O60256 369 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 NPTXRO95502 500 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 PIGRP01833 764 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 EZRP15311 586 aaKnown RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 NQO1P15559 274 aaKnown RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 ICAM3P32942 547 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 ADCYAP1R1P41586 468 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 SESN3P58005 492 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 MCL1Q07820 350 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 SETDB1Q15047 1291 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 LACTB2Q53H82 288 aaPredicted RBP11.6□□□□□ -0.55
SCFD2-202ENST00000401642 TNFAIP8L3Q5GJ75 292 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 LRRC6Q86X45 466 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 OR6B3Q8NGW1 331 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 AGAP11Q8TF27 550 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 TMEM176AQ96HP8 235 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 RBPJLQ9UBG7 517 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 GGA2Q9UJY4 613 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 TSPAN16Q9UKR8 245 aa11.6□□□□□ -0.55
SCFD2-202ENST00000401642 KBTBD13C9JR72 458 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 KRT7P08729 469 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 LCP1P13796 627 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
SCFD2-202ENST00000401642 CRADDP78560 199 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 SLC25A11Q02978 314 aaKnown RBP11.59□□□□□ -0.55
SCFD2-202ENST00000401642 ZBTB16Q05516 673 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 XRCC4Q13426 336 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 CASC4Q6P4E1 433 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 ZNF513Q8N8E2 541 aaPredicted RBP11.59□□□□□ -0.55
SCFD2-202ENST00000401642 CLEC4CQ8WTT0 213 aa11.59□□□□□ -0.55
SCFD2-202ENST00000401642 N4BP2L2Q92802 583 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms