RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RALAP11233 206 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TBXAS1P24557 533 aaPredicted RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 NOMO3P69849 1222 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PLEKHA7Q6IQ23 1121 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ZNF365Q70YC5 407 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RELL1Q8IUW5 271 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 EXD1Q8NHP7 514 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ADPGKQ9BRR6 497 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 MSTO1Q9BUK6 570 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CNTN6Q9UQ52 1028 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 R3HDM2Q9Y2K5 976 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FAM189A1O60320 539 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 VNN1O95497 513 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CETN2P41208 172 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 MAMLD1Q13495 774 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DSC3Q14574 896 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CCDC38Q502W7 563 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 LMBRD2Q68DH5 695 aaPredicted RBP16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 APBB1IPQ7Z5R6 666 aaPredicted RBP16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ZBTB33Q86T24 672 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DYDC1Q8WWB3 177 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 APBB2Q92870 758 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SGSM3Q96HU1 749 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CGRRF1Q99675 332 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ELAC2Q9BQ52 826 aaKnown RBP16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 C11orf70Q9BRQ4 267 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 OSBPL8Q9BZF1 889 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CDT1Q9H211 546 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RBAKQ9NYW8 714 aaPredicted RBP16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PRKAG2Q9UGJ0 569 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 LGALS13Q9UHV8 139 aa16.75■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CHUKO15111 745 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CLTAP09496 248 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 GNA15P30679 374 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 IFNAR2P48551 515 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 LMNB2Q03252 620 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TRIP13Q15645 432 aaPredicted RBP16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DCAF4L1Q3SXM0 396 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 UBXN11Q5T124 520 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PHLDB2Q86SQ0 1253 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FUKQ8N0W3 1084 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TMEM199Q8N511 208 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 DBF4BQ8NFT6 615 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SEPT8Q92599 483 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FAM84AQ96KN4 292 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 NINJ2Q9NZG7 142 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TMEM120BA0PK00 339 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 OGTO15294 1046 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ACOT2P49753 483 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 WNT7BP56706 349 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TAS2R40P59535 323 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 KYNUQ16719 465 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TWF2Q6IBS0 349 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SPOPLQ6IQ16 392 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 LLGL2Q6P1M3 1020 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CYB5D1Q6P9G0 228 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CRELD2Q6UXH1 353 aaPredicted RBP16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 C7orf61Q8IZ16 206 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CCHCR1Q8TD31 782 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 VWCEQ96DN2 955 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CCDC77Q9BR77 488 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 HEMGNQ9BXL5 484 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 EIF2AQ9BY44 585 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 APOBEC3GQ9HC16 384 aaKnown RBP16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PARVAQ9NVD7 372 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 HAUS2Q9NVX0 235 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SLC12A4Q9UP95 1085 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PTPRJQ12913 1337 aa16.74■□□□□ 0.27
CHRFAM7A-203ENST00000401522 MGEA5O60502 916 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 KYAT1Q16773 422 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TMEM270Q6UE05 265 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 VSTM1Q6UX27 236 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ADAM2Q99965 735 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RGS18Q9NS28 235 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 IP6K2Q9UHH9 426 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SCN5AQ14524 2016 aa16.73■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SNX3O60493 162 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ATP2C2O75185 946 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 NPTXRO95502 500 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 OAS1P00973 400 aaKnown RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ABHD2P08910 425 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CSF2RAP15509 400 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 STAT4Q14765 748 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SNCBQ16143 134 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 C2CD6Q53TS8 623 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 IZUMO3Q5VZ72 239 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TRPM8Q7Z2W7 1104 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RTN4RL1Q86UN2 441 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PASD1Q8IV76 773 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FEZF2Q8TBJ5 459 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CPSF3Q9UKF6 684 aaKnown RBP16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ACTL7BQ9Y614 415 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ZNF623O75123 536 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms