RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 H7C0C1 242 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 TBC1D12O60347 775 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 ENO1P06733 434 aaKnown RBP11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 ITGAVP06756 1048 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 LINGO3P0C6S8 592 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 PTPN4P29074 926 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 ATP5OP48047 213 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 CLDN10P78369 228 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 ZNF276Q8N554 614 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 VCPIP1Q96JH7 1222 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 WRNIP1Q96S55 665 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 TRIM55Q9BYV6 548 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 SHCBP1LQ9BZQ2 653 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 NMUR2Q9GZQ4 415 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 GJA3Q9Y6H8 435 aa11.06□□□□□ -0.64
PPP4R1-203ENST00000400556 CCDC189A1A4V9 331 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 CXorf49A8MYA2 514 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 CAPN9O14815 690 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 INHBAP08476 426 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 KDELR1P24390 212 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 MIPP30301 263 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 PHBP35232 272 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 SLC25A11Q02978 314 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 BLMHQ13867 455 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 NKD2Q969F2 451 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 TEPSINQ96N21 525 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 CYTH2Q99418 400 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 MAGEB5Q9BZ81 275 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 R3HDMLQ9H3Y0 253 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ACSS3Q9H6R3 686 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 NMRK1Q9NWW6 199 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ZNF214Q9UL59 606 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 H3BRJ5 948 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 INO80B-WBP1J3KQ70 363 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 C2CD2LO14523 706 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ERBB2P04626 1255 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 F7P08709 466 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 GMPRP36959 345 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 RGS7P49802 495 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 PARP6Q2NL67 630 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 FAM83AQ86UY5 434 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 TDRPQ86YL5 185 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 BANPQ8N9N5 519 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 NRG4Q8WWG1 115 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 SYT15Q9BQS2 421 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 INO80BQ9C086 356 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 NIF3L1Q9GZT8 377 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 RAB6BQ9NRW1 208 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 SLC17A6Q9P2U8 582 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 SLC24A2Q9UI40 661 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 WDR81Q562E7 1941 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 LGR5O75473 907 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ZWINTO95229 277 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ESRRAP11474 423 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 CDH6P55285 790 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 PIGHQ14442 188 aaPredicted RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 DDX50Q9BQ39 737 aaKnown RBP11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 ZFATQ9P243 1243 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 AFG3L2Q9Y4W6 797 aa11.05□□□□□ -0.64
PPP4R1-203ENST00000400556 CXCL8P10145 99 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 DPEP1P16444 411 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 AMPD1P23109 780 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 MCL1Q07820 350 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 THOC5Q13769 683 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 SGSM1Q2NKQ1 1148 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 SLC45A4Q5BKX6 768 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 EEF1DP3Q658K8 133 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 TMEM154Q6P9G4 183 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 ARID3BQ8IVW6 561 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 FAF2Q96CS3 445 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 FAM161BQ96MY7 647 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 PEBP4Q96S96 227 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 IQCGQ9H095 443 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 SMYD3Q9H7B4 428 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 TAS2R1Q9NYW7 299 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 SENP1Q9P0U3 644 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 DRG1Q9Y295 367 aaKnown RBP11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 MAD1L1Q9Y6D9 718 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 MEI4A8MW99 385 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 RFC5P40937 340 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 NAMPTP43490 491 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 RASSF2P50749 326 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 DPYSL3Q14195 570 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 FAM102AQ5T9C2 384 aaPredicted RBP11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 SNX30Q5VWJ9 437 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 MZB1Q8WU39 189 aa11.04□□□□□ -0.64
PPP4R1-203ENST00000400556 INPP5DQ92835 1189 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms